RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ARMCX2Q7L311 632 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 AACSQ86V21 672 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 ERC1Q8IUD2 1116 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 CPXCR1Q8N123 301 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 CHST13Q8NET6 341 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 FBXO22Q8NEZ5 403 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 PHOSPHO2Q8TCD6 241 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 FRAT1Q92837 279 aaPredicted RBP6.23□□□□□ -1.41
SPG11-208ENST00000558155 NOC4LQ9BVI4 516 aaKnown RBP6.23□□□□□ -1.41
SPG11-208ENST00000558155 PRRC2BQ5JSZ5 2229 aaKnown RBP6.23□□□□□ -1.41
SPG11-208ENST00000558155 GBF1Q92538 1859 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 ZNF532Q9HCE3 1301 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 ASB14A6NK59 587 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 USP17L12C9JPN9 530 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 USP17L21D6R901 530 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 F5H6K3 240 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 SMIM22K7EJ46 135 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 RFXAPO00287 272 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 CTAGE5O15320 804 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 DYNC1LI2O43237 492 aaPredicted RBP6.22□□□□□ -1.41
SPG11-208ENST00000558155 FDX1P10109 184 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 BEX3Q00994 111 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 KLRC3Q07444 240 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 FSCN1Q16658 493 aaKnown RBP6.22□□□□□ -1.41
SPG11-208ENST00000558155 HSP90AB4PQ58FF6 505 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 IQSEC1Q6DN90 963 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 C16orf86Q6ZW13 317 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.22□□□□□ -1.41
SPG11-208ENST00000558155 CLEC10AQ8IUN9 316 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 CCDC144CPQ8IYA2 1237 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 LCORLQ8N3X6 602 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 CLUAP1Q96AJ1 413 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 TRPV6Q9H1D0 765 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 CERS4Q9HA82 394 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 TLR7Q9NYK1 1049 aaKnown RBP6.22□□□□□ -1.41
SPG11-208ENST00000558155 Q9Y3F1 56 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 RIPK3Q9Y572 518 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 PARP14Q460N5 1801 aa6.22□□□□□ -1.41
SPG11-208ENST00000558155 MCM3APO60318 1980 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 TCRBV5S4A2TA0A5A2 114 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 GOLIM4O00461 696 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 ADCY6O43306 1168 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 PRKAB2O43741 272 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 CA3P07451 260 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 RFC2P35250 354 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 OAZ1P54368 228 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 ZKSCAN2Q63HK3 967 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 DEFB128Q7Z7B8 93 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 TMEM57Q8N5G2 664 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 RETREG2Q8NC44 543 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.21□□□□□ -1.42
SPG11-208ENST00000558155 ARNTL2Q8WYA1 636 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 KIFC2Q96AC6 838 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 SCLYQ96I15 445 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 SLC9A7Q96T83 725 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.21□□□□□ -1.425e-6■■□□□ 11.5
SPG11-208ENST00000558155 ARMT1Q9H993 441 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 MKNK2Q9HBH9 465 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 RAVER2Q9HCJ3 691 aaKnown RBP6.21□□□□□ -1.42
SPG11-208ENST00000558155 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 NYAP2Q9P242 653 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 FEM1BQ9UK73 627 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.42
SPG11-208ENST00000558155 NAV1Q8NEY1 1877 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 UMODL1Q5DID0 1318 aa6.21□□□□□ -1.42
SPG11-208ENST00000558155 CYP2D7A0A087X1C5 515 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 B4GALT4O60513 344 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 MBD4O95243 580 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 NDUFB10O96000 172 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 IFIT2P09913 472 aaKnown RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 NUDT7P0C024 238 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 ALADP13716 330 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 CNTN2Q02246 1040 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 TAP1Q03518 808 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 CSPP1Q1MSJ5 1256 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 TKFCQ3LXA3 575 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 TLK2Q86UE8 772 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 ZNF444Q8N0Y2 327 aaPredicted RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 CLASRPQ8N2M8 674 aaKnown RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 AGBL1Q96MI9 1066 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 UIMC1Q96RL1 719 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 DNAJC2Q99543 621 aaKnown RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 NUP88Q99567 741 aaPredicted RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 FTOQ9C0B1 505 aaKnown RBP eCLIP6.2□□□□□ -1.42
SPG11-208ENST00000558155 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 ALDH8A1Q9H2A2 487 aaPredicted RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 SLC38A10Q9HBR0 1119 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 ZNF287Q9HBT7 754 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 GPHNQ9NQX3 736 aaPredicted RBP6.2□□□□□ -1.42
SPG11-208ENST00000558155 POLR3EQ9NVU0 708 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 CLIP2Q9UDT6 1046 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 TNNQ9UQP3 1299 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 COG6Q9Y2V7 657 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 SLC4A4Q9Y6R1 1079 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 VCANP13611 3396 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms