RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 MTA3Q9BTC8 594 aa12.04□□□□□ -0.48
PPP1R3E-202ENST00000558058 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
PPP1R3E-202ENST00000558058 IGKV6D-41A0A0C4DH26 115 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 SASH3O75995 380 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 CAP2P40123 477 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 GRIN1Q05586 938 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 SPP2Q13103 211 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 GPATCH11Q8N954 259 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 RRP36Q96EU6 259 aaKnown RBP12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 PEX10O60683 326 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 MCM7P33993 719 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 HOMER2Q9NSB8 354 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 MYH8P13535 1937 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 CCDC192P0DO97 292 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 CASQ1P31415 396 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 KRT2P35908 639 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 MTMR2Q13614 643 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 ICE2Q659A1 982 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 FAM83AQ86UY5 434 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 PDILTQ8N807 584 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
PPP1R3E-202ENST00000558058 NR1I2O75469 434 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 CDC25AP30304 524 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 ZSCAN26Q16670 478 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 INF2Q27J81 1249 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 LRRC8AQ8IWT6 810 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 CFAP45Q9UL16 551 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 ZHX2Q9Y6X8 837 aa12.02□□□□□ -0.48
PPP1R3E-202ENST00000558058 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 PPP1R11O60927 126 aaPredicted RBP12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 SLU7O95391 586 aaKnown RBP12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 TOB1P50616 345 aaPredicted RBP12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.49
PPP1R3E-202ENST00000558058 ZNF646O15015 1829 aaPredicted RBP12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 TRAF5O00463 557 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 MTMR14Q8NCE2 650 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 PCDHA7Q9UN72 937 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 STK36Q9NRP7 1315 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 ZRANB2O95218 330 aaKnown RBP eCLIP12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 GNAQP50148 359 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 NPY5RQ15761 445 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 E2F4Q16254 413 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 MUM1L1Q5H9M0 696 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 GJA10Q969M2 543 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 PHF20Q9BVI0 1012 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 ARHGEF10LQ9HCE6 1279 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 SPTLC2O15270 562 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 BMP3P12645 472 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 EPHX2P34913 555 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 CCAR1Q8IX12 1150 aaKnown RBP12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
PPP1R3E-202ENST00000558058 SIPA1L1O43166 1804 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 ASNSP08243 561 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 SKILP12757 684 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 HMGCS2P54868 508 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 UBXN2AP68543 259 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 CDC37Q16543 378 aaPredicted RBP12□□□□□ -0.49
PPP1R3E-202ENST00000558058 LETM2Q2VYF4 491 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 ISM2Q6H9L7 571 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 LINC00301Q8NCQ3 95 aa12□□□□□ -0.49
PPP1R3E-202ENST00000558058 GOLPH3LQ9H4A5 285 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms