RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 VGLL4Q14135 290 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 MAP3K11Q16584 847 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 WDR18Q9BV38 432 aa23.26■■□□□ 1.31
SNRPA1-205ENST00000558036 VWA3AA6NCI4 1184 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 WDR46O15213 610 aaKnown RBP23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 CCNT1O60563 726 aaKnown RBP23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 BMP15O95972 392 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 POTEIP0CG38 1075 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 POTEJP0CG39 1038 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 C4orf32Q8N8J7 132 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 ERCC4Q92889 916 aaPredicted RBP23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 TMEM60Q9H2L4 133 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 RANBP17Q9H2T7 1088 aaKnown RBP23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 HPSEQ9Y251 543 aa23.25■■□□□ 1.31
SNRPA1-205ENST00000558036 ZNF202O95125 648 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 LETM1O95202 739 aaPredicted RBP23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 HMGCS2P54868 508 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 IL17AQ16552 155 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 MOB2Q70IA6 237 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 NEK8Q86SG6 692 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 FAM160B2Q86V87 743 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 CDCA5Q96FF9 252 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 AS3MTQ9HBK9 375 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 ZC3H15Q8WU90 426 aaKnown RBP23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 CNKSR2Q8WXI2 1034 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 PANK2Q9BZ23 570 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 RPAP3Q9H6T3 665 aaPredicted RBP23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 SNCAIPQ9Y6H5 919 aa23.24■■□□□ 1.31
SNRPA1-205ENST00000558036 IQCA1LA6NCM1 817 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 MEIS2O14770 477 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 OPLAHO14841 1288 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 PPP1R12BO60237 982 aaPredicted RBP23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 PLA2G6O60733 806 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 SYKP43405 635 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 RBSNQ9H1K0 784 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 KCNH3Q9ULD8 1083 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 EDIL3O43854 480 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 NOL9Q5SY16 702 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 EPSTI1Q96J88 318 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 P2RX7Q99572 595 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 SLF1Q9BQI6 1058 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
SNRPA1-205ENST00000558036 FLOT1O75955 427 aa23.22■■□□□ 1.31
SNRPA1-205ENST00000558036 USP14P54578 494 aa23.22■■□□□ 1.31
SNRPA1-205ENST00000558036 MAP3K9P80192 1104 aa23.22■■□□□ 1.31
SNRPA1-205ENST00000558036 FERMT2Q96AC1 680 aa23.22■■□□□ 1.31
SNRPA1-205ENST00000558036 SDF4Q9BRK5 362 aa23.22■■□□□ 1.31
SNRPA1-205ENST00000558036 HOXA13P31271 388 aaPredicted RBP23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 ZNF579Q8NAF0 562 aaKnown RBP23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 RNF214Q8ND24 703 aa23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 MORC2Q9Y6X9 1032 aaPredicted RBP23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 PDILTQ8N807 584 aa23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 PRPF38AQ8NAV1 312 aaKnown RBP23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 AGBL1Q96MI9 1066 aa23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 CLEC11AQ9Y240 323 aa23.21■■□□□ 1.31
SNRPA1-205ENST00000558036 FAM237AA0A1B0GTK4 181 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 TDP2O95551 362 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 TTLL12Q14166 644 aaPredicted RBP23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 AFG3L2Q9Y4W6 797 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 XRCC6P12956 609 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 LONRF3Q496Y0 759 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 LDHDQ86WU2 507 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 TBC1D5Q92609 795 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 CLMNQ96JQ2 1002 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
SNRPA1-205ENST00000558036 NEMFO60524 1076 aa23.19■■□□□ 1.3
SNRPA1-205ENST00000558036 WNK4Q96J92 1243 aa23.19■■□□□ 1.3
SNRPA1-205ENST00000558036 CSADQ9Y600 493 aa23.19■■□□□ 1.3
SNRPA1-205ENST00000558036 ZNF536O15090 1300 aa23.19■■□□□ 1.3
SNRPA1-205ENST00000558036 A0A087WWV3 80 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 POLR2DO15514 142 aaKnown RBP23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 SLC37A4O43826 429 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 CDC25AP30304 524 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 FMR1Q06787 632 aaKnown RBP eCLIP23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 MAP1SQ66K74 1059 aaPredicted RBP23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 PNMA8AQ86V59 439 aaPredicted RBP23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 CPXCR1Q8N123 301 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 ANO3Q9BYT9 981 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 ELP3Q9H9T3 547 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 SMCHD1A6NHR9 2005 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 A0A087X0B3 334 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 NF2P35240 595 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 IREB2P48200 963 aaKnown RBP23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 MRE11P49959 708 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 PPP1R9AQ9ULJ8 1098 aa23.18■■□□□ 1.3
SNRPA1-205ENST00000558036 CFBP00751 764 aa23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 ARL6IP4Q66PJ3 421 aaKnown RBP23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 CCPG1Q9ULG6 757 aa23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 TRAF5O00463 557 aa23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 TYRO3Q06418 890 aa23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 DTHD1Q6ZMT9 781 aa23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 RAVER2Q9HCJ3 691 aaKnown RBP23.17■■□□□ 1.3
SNRPA1-205ENST00000558036 SCN4AP35499 1836 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms