RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 BIN2Q9UBW5 565 aaPredicted RBP19.42■□□□□ 0.7
PBX4-202ENST00000557978 GOLGA8AA7E2F4 631 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 GOLGA8BA8MQT2 603 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 CYTH3O43739 400 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 ELNP15502 786 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 METAP2P50579 478 aaKnown RBP eCLIP19.42■□□□□ 0.7
PBX4-202ENST00000557978 ANKRD1Q15327 319 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 USH1GQ495M9 461 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 ARMC5Q96C12 935 aa19.42■□□□□ 0.7
PBX4-202ENST00000557978 DIS3Q9Y2L1 958 aaKnown RBP19.42■□□□□ 0.7
PBX4-202ENST00000557978 PFASO15067 1338 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 ABCB11O95342 1321 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 PNMA6FA0A0J9YX94 578 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 HMGCRP04035 888 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
PBX4-202ENST00000557978 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
PBX4-202ENST00000557978 TMTC3Q6ZXV5 915 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 SRBD1Q8N5C6 995 aaKnown RBP19.41■□□□□ 0.7
PBX4-202ENST00000557978 SH3TC2Q8TF17 1288 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 RRP36Q96EU6 259 aaKnown RBP19.41■□□□□ 0.7
PBX4-202ENST00000557978 PIGSQ96S52 555 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 MAF1Q9H063 256 aa19.41■□□□□ 0.7
PBX4-202ENST00000557978 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
PBX4-202ENST00000557978 COBLO75128 1261 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 MUM1L1Q5H9M0 696 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 NPLOC4Q8TAT6 608 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 TRIB2Q92519 343 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 ZNF274Q96GC6 653 aaPredicted RBP19.4■□□□□ 0.7
PBX4-202ENST00000557978 ZNF333Q96JL9 665 aa19.4■□□□□ 0.7
PBX4-202ENST00000557978 A1CFQ9NQ94 594 aaKnown RBP19.4■□□□□ 0.7
PBX4-202ENST00000557978 MRPL11Q9Y3B7 192 aaKnown RBP19.4■□□□□ 0.7
PBX4-202ENST00000557978 NID2Q14112 1375 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 PGK2P07205 417 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 NEK4P51957 841 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 SLC35G1Q2M3R5 365 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 OLFML2BQ68BL8 750 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 NSMFQ6X4W1 530 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 PCDHA1Q9Y5I3 950 aa19.39■□□□□ 0.69
PBX4-202ENST00000557978 DNAJC25-GNG10A0A024R161 153 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 POTEB2H3BUK9 544 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 PDIA3P30101 505 aaKnown RBP19.38■□□□□ 0.69
PBX4-202ENST00000557978 CCL14Q16627 93 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 ZNF792Q3KQV3 632 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 MFSD14CQ5VZR4 134 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 CMTR1Q8N1G2 835 aaKnown RBP19.38■□□□□ 0.69
PBX4-202ENST00000557978 CCDC82Q8N4S0 544 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 RGS22Q8NE09 1264 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 MAML3Q96JK9 1138 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 BACH2Q9BYV9 841 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
PBX4-202ENST00000557978 INHAP05111 366 aa19.37■□□□□ 0.69
PBX4-202ENST00000557978 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
PBX4-202ENST00000557978 MSL3Q8N5Y2 521 aaKnown RBP19.37■□□□□ 0.69
PBX4-202ENST00000557978 IL27Q8NEV9 243 aa19.37■□□□□ 0.69
PBX4-202ENST00000557978 CLEC4DQ8WXI8 215 aa19.37■□□□□ 0.69
PBX4-202ENST00000557978 PTPDC1A2A3K4 754 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 NFIBO00712 420 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 CDC27P30260 824 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 AK2P54819 239 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 RNF207Q6ZRF8 634 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 ZNF467Q7Z7K2 595 aaPredicted RBP19.36■□□□□ 0.69
PBX4-202ENST00000557978 SAMD3Q8N6K7 520 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 TMEM106CQ9BVX2 250 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
PBX4-202ENST00000557978 MAP3K20Q9NYL2 800 aaKnown RBP19.36■□□□□ 0.69
PBX4-202ENST00000557978 FRMPD3Q5JV73 1810 aa19.36■□□□□ 0.69
PBX4-202ENST00000557978 KIAA1217Q5T5P2 1943 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 CCDC85CA6NKD9 419 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 PPP1R11O60927 126 aaPredicted RBP19.35■□□□□ 0.69
PBX4-202ENST00000557978 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
PBX4-202ENST00000557978 BAATQ14032 418 aaPredicted RBP19.35■□□□□ 0.69
PBX4-202ENST00000557978 FAM133AQ8N9E0 248 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 TINF2Q9BSI4 451 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 FLRT1Q9NZU1 646 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 RBM27Q9P2N5 1060 aaKnown RBP19.35■□□□□ 0.69
PBX4-202ENST00000557978 ADD3Q9UEY8 706 aaKnown RBP19.35■□□□□ 0.69
PBX4-202ENST00000557978 RPTORQ8N122 1335 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
PBX4-202ENST00000557978 RPS6P62753 249 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 HMX1Q9NP08 348 aaPredicted RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 BRCA2P51587 3418 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 PRKAR2AP13861 404 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 CNTN2Q02246 1040 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 CACNB2Q08289 660 aaPredicted RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 FUT2Q10981 343 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 MAMDC4Q6UXC1 1216 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 MPHOSPH6Q99547 160 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 KIF2CQ99661 725 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 LARP6Q9BRS8 491 aaKnown RBP19.34■□□□□ 0.69
PBX4-202ENST00000557978 RNF208Q9H0X6 261 aa19.34■□□□□ 0.69
PBX4-202ENST00000557978 SYNGAP1Q96PV0 1343 aa19.33■□□□□ 0.68
PBX4-202ENST00000557978 LOC102724159A0A0B4J2E5 919 aa19.33■□□□□ 0.68
PBX4-202ENST00000557978 ASB14A6NK59 587 aa19.33■□□□□ 0.68
PBX4-202ENST00000557978 hCG_1984214I3L0E3 225 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms