RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 IGF2-ASQ6U949 168 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 TMEM102Q8N9M5 508 aaPredicted RBP9.18□□□□□ -0.94
SHC4-204ENST00000557797 GALNT11Q8NCW6 608 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 WNK4Q96J92 1243 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 CITED4Q96RK1 184 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 EYA3Q99504 573 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 OSMRQ99650 979 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 GDF15Q99988 308 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
SHC4-204ENST00000557797 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
SHC4-204ENST00000557797 SRA1Q9HD15 236 aaKnown RBP9.18□□□□□ -0.94
SHC4-204ENST00000557797 SCAF8Q9UPN6 1271 aaKnown RBP9.18□□□□□ -0.94
SHC4-204ENST00000557797 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 POLR3DP05423 398 aaPredicted RBP9.17□□□□□ -0.94
SHC4-204ENST00000557797 FURINP09958 794 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 EDN3P14138 238 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 NRG1Q02297 640 aaPredicted RBP9.17□□□□□ -0.94
SHC4-204ENST00000557797 MAP4K3Q8IVH8 894 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 STAP2Q9UGK3 403 aa9.17□□□□□ -0.94
SHC4-204ENST00000557797 COL1A1P02452 1464 aaPredicted RBP9.16□□□□□ -0.94
SHC4-204ENST00000557797 RPTORQ8N122 1335 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 GJB1P08034 283 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 CDC25BP30305 580 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 PRMT2P55345 433 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 ORC1Q13415 861 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 NBPF9Q3BBW0 867 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 TXNRD3Q86VQ6 643 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 PTPN18Q99952 460 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 RBCK1Q9BYM8 510 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 SOX13Q9UN79 622 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 ANGEL1Q9UNK9 670 aaKnown RBP9.16□□□□□ -0.94
SHC4-204ENST00000557797 ZSWIM8A7E2V4 1837 aa9.16□□□□□ -0.94
SHC4-204ENST00000557797 WNT10BO00744 389 aa9.15□□□□□ -0.94
SHC4-204ENST00000557797 DIAPH1O60610 1272 aaKnown RBP9.15□□□□□ -0.94
SHC4-204ENST00000557797 ADAM23O75077 832 aa9.15□□□□□ -0.94
SHC4-204ENST00000557797 GPSM2P81274 684 aa9.15□□□□□ -0.94
SHC4-204ENST00000557797 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
SHC4-204ENST00000557797 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
SHC4-204ENST00000557797 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.94
SHC4-204ENST00000557797 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
SHC4-204ENST00000557797 PANK3Q9H999 370 aa9.15□□□□□ -0.94
SHC4-204ENST00000557797 COL4A1P02462 1669 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 FSCN2O14926 492 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 HCLS1P14317 486 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 NOS3P29474 1203 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 MMP14P50281 582 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 FAM109BQ6ICB4 259 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 APOBEC3FQ8IUX4 373 aaKnown RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 GALNT12Q8IXK2 581 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 FAM122AQ96E09 287 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 CLMNQ96JQ2 1002 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 BHLHE41Q9C0J9 482 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 KCNK4Q9NYG8 393 aa9.14□□□□□ -0.95
SHC4-204ENST00000557797 COL3A1P02461 1466 aaPredicted RBP9.14□□□□□ -0.95
SHC4-204ENST00000557797 DNAH12Q6ZR08 3092 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 H3BRJ5 948 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 FARP2O94887 1054 aaPredicted RBP9.13□□□□□ -0.95
SHC4-204ENST00000557797 CAPN2P17655 700 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 ERCC3P19447 782 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 PRKG1Q13976 671 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
SHC4-204ENST00000557797 NKAPLQ5M9Q1 402 aa9.13□□□□□ -0.95
SHC4-204ENST00000557797 BIN2Q9UBW5 565 aaPredicted RBP9.13□□□□□ -0.95
SHC4-204ENST00000557797 OTOFQ9HC10 1997 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 A0A1W2PP55 124 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 WISP1O95388 367 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 ITGB7P26010 798 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 IREB2P48200 963 aaKnown RBP9.12□□□□□ -0.95
SHC4-204ENST00000557797 LACTBP83111 547 aaPredicted RBP9.12□□□□□ -0.95
SHC4-204ENST00000557797 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 VN1R5Q7Z5H4 357 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 NLRP10Q86W26 655 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 TDHQ8IZJ6 230 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 CELF1Q92879 486 aaKnown RBP9.12□□□□□ -0.95
SHC4-204ENST00000557797 GUCD1Q96NT3 240 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 NIF3L1Q9GZT8 377 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
SHC4-204ENST00000557797 RRP7AQ9Y3A4 280 aaKnown RBP9.12□□□□□ -0.95
SHC4-204ENST00000557797 ECM29Q5VYK3 1845 aa9.12□□□□□ -0.95
SHC4-204ENST00000557797 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 SH3TC1Q8TE82 1336 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 METTL12A8MUP2 240 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 ADAM11O75078 769 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 CCL5P13501 91 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 CD68P34810 354 aaPredicted RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
SHC4-204ENST00000557797 HGSNATQ68CP4 663 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
SHC4-204ENST00000557797 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms