RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FBXL21Q9UKT6 434 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 FAM50BQ9Y247 325 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 DIS3Q9Y2L1 958 aaKnown RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 PCDHB12Q9Y5F1 795 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 LOC100289279A0A1B0GTE1 492 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 TMPRSS2O15393 492 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 IL33O95760 270 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 CST3P01034 146 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 LTFP02788 710 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 SCG5P05408 212 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 MYL3P08590 195 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 HSPA6P17066 643 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 LPOP22079 712 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 ALAS2P22557 587 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 CAP2P40123 477 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ECI1P42126 302 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 SMCPP49901 116 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 AFF1P51825 1210 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 GJA9P57773 515 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 NLRP12P59046 1061 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ZNF280AP59817 542 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 RBM10P98175 930 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 AMPD2Q01433 879 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 SF1Q15637 639 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 NBPF9Q3BBW0 867 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 INAVAQ3KP66 663 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 SLC35F1Q5T1Q4 408 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 PRAMEF13Q5VWM6 474 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ERAP2Q6P179 960 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 TOGARAM2Q6ZUX3 1019 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 EPM2AIP1Q7L775 607 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 ZC3H7AQ8IWR0 971 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 IFNL2Q8IZJ0 200 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 C1orf162Q8NEQ5 155 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 NUDT8Q8WV74 236 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 GJA10Q969M2 543 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 KLHDC7BQ96G42 594 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 FAXDC2Q96IV6 333 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 LRGUKQ96M69 825 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ZFYVE21Q9BQ24 234 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 HERPUD2Q9BSE4 406 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 CARD10Q9BWT7 1032 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ATXN3LQ9H3M9 355 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 NOL6Q9H6R4 1146 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 JPH1Q9HDC5 661 aaPredicted RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 NMRK2Q9NPI5 230 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 PLCB1Q9NQ66 1216 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 C1orf112Q9NSG2 853 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 THG1LQ9NWX6 298 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 MKS1Q9NXB0 559 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 SAP30BPQ9UHR5 308 aaKnown RBP4.75□□□□□ -1.65
TDP1-217ENST00000557782 LZTS1Q9Y250 596 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ZNF652Q9Y2D9 606 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 FHOD1Q9Y613 1164 aa4.75□□□□□ -1.65
TDP1-217ENST00000557782 ASXL2Q76L83 1435 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 ELOA3CA0A087WX78 387 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 ELOA3DA6NLF2 546 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 SOBPA7XYQ1 873 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 APAF1O14727 1248 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 SHOXO15266 292 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 ASGR2P07307 311 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 RBP3P10745 1247 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 GRIK1P39086 918 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 TRAPPC10P48553 1259 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 SETQ01105 290 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 ADCY1Q08828 1119 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 PPP2R5DQ14738 602 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 PCBP2Q15366 365 aaKnown RBP eCLIP4.74□□□□□ -1.65
TDP1-217ENST00000557782 MAPRE1Q15691 268 aaKnown RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 NKG7Q16617 165 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 ELOA3BQ3SY89 546 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 CCDC70Q6NSX1 233 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 PGM2L1Q6PCE3 622 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 RSPO2Q6UXX9 243 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 CMTR2Q8IYT2 770 aaKnown RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 STK11IPQ8N1F8 1099 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 IGSF22Q8N9C0 903 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 VPS37AQ8NEZ2 397 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 ELOA3Q8NG57 546 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 SYTL5Q8TDW5 730 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 C1orf159Q96HA4 380 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 SCLT1Q96NL6 688 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 TMX4Q9H1E5 349 aaPredicted RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 NLRC4Q9NPP4 1024 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 PRR13Q9NZ81 148 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 CRIM1Q9NZV1 1036 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 B4GALT6Q9UBX8 382 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 PHTF1Q9UMS5 762 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 GTF2A1LQ9UNN4 478 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 SF3B6Q9Y3B4 125 aaKnown RBP4.74□□□□□ -1.65
TDP1-217ENST00000557782 PCDHA8Q9Y5H6 950 aa4.74□□□□□ -1.65
TDP1-217ENST00000557782 FZD9O00144 591 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 GPR25O00155 361 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 C2CD2LO14523 706 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 AXIN1O15169 862 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 PMM2O15305 246 aa4.73□□□□□ -1.65
TDP1-217ENST00000557782 XPOTO43592 962 aaKnown RBP4.73□□□□□ -1.65
TDP1-217ENST00000557782 KCNA6P17658 529 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms