RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ZNF536O15090 1300 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
CHD8-214ENST00000557727 MCM3APO60318 1980 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 TMEM232C9JQI7 657 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 VWA5AO00534 786 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 CYTH3O43739 400 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
CHD8-214ENST00000557727 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 PSMA5P28066 241 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 SLC16A2P36021 539 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 GCLCP48506 637 aaPredicted RBP10.54□□□□□ -0.72
CHD8-214ENST00000557727 LBX1P52954 281 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 SART3Q15020 963 aaKnown RBP10.54□□□□□ -0.72
CHD8-214ENST00000557727 Q6ZUG5 572 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 MAP3K14Q99558 947 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 ARHGAP39Q9C0H5 1083 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
CHD8-214ENST00000557727 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 FEM1BQ9UK73 627 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 MTMR7Q9Y216 660 aa10.54□□□□□ -0.72
CHD8-214ENST00000557727 ATP2A1O14983 1001 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 RAD21O60216 631 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 DDAH1O94760 285 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 RXRAP19793 462 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 STAT2P52630 851 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 ERVK-24P63145 666 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 APOBRQ0VD83 1088 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 FUT2Q10981 343 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 TMTC2Q8N394 836 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 BRF1Q92994 677 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 PORCNQ9H237 461 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 RANBP17Q9H2T7 1088 aaKnown RBP10.53□□□□□ -0.72
CHD8-214ENST00000557727 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 HOXC10Q9NYD6 342 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
CHD8-214ENST00000557727 CENPFP49454 3210 aa10.52□□□□□ -0.72
CHD8-214ENST00000557727 ERICH2A1L162 156 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
CHD8-214ENST00000557727 TAL1P17542 331 aaPredicted RBP10.52□□□□□ -0.73
CHD8-214ENST00000557727 SNAP25P60880 206 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 SP3Q02447 781 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 CCDC96Q2M329 555 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 MB21D1Q8N884 522 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
CHD8-214ENST00000557727 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 MOV10L1Q9BXT6 1211 aaKnown RBP10.52□□□□□ -0.73
CHD8-214ENST00000557727 UBA5Q9GZZ9 404 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 RIOX1Q9H6W3 641 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
CHD8-214ENST00000557727 KLF18A0A0U1RQI7 1052 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
CHD8-214ENST00000557727 FKTNO75072 461 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 PLEKHA8P1O95397 391 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CDC27P30260 824 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 RCAN1P53805 252 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 AK2P54819 239 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 TMTC3Q6ZXV5 915 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CATIPQ7Z7H3 387 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 SRBD1Q8N5C6 995 aaKnown RBP10.51□□□□□ -0.73
CHD8-214ENST00000557727 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 GPRC5AQ8NFJ5 357 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CD99L2Q8TCZ2 262 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CHURC1Q8WUH1 139 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 SPATC1LQ9H0A9 340 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 JMJD4Q9H9V9 463 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 PDRG1Q9NUG6 133 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 TPCN1Q9ULQ1 816 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 RIPK3Q9Y572 518 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
CHD8-214ENST00000557727 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 CD2BP2O95400 341 aaKnown RBP10.5□□□□□ -0.73
CHD8-214ENST00000557727 LARGE1O95461 756 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 PDIA3P30101 505 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms