RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 RIPK3Q9Y572 518 aa16.31■□□□□ 0.2
RIPK3-206ENST00000557624 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 MORF4L1Q9UBU8 362 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 PNMA2Q9UL42 364 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 hCG_1984214I3L0E3 225 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 ECM2O94769 699 aaPredicted RBP16.3■□□□□ 0.2
RIPK3-206ENST00000557624 BCRP11274 1271 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 CCNA1P78396 465 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
RIPK3-206ENST00000557624 TRAF1Q13077 416 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 RIOX2Q8IUF8 465 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 ZNF713Q8N859 430 aaPredicted RBP16.3■□□□□ 0.2
RIPK3-206ENST00000557624 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 RNF146Q9NTX7 359 aa16.3■□□□□ 0.2
RIPK3-206ENST00000557624 ABCB11O95342 1321 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 XBP1P17861 261 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 ERCC3P19447 782 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
RIPK3-206ENST00000557624 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 PORCNQ9H237 461 aa16.29■□□□□ 0.2
RIPK3-206ENST00000557624 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
RIPK3-206ENST00000557624 NFIBO00712 420 aa16.28■□□□□ 0.2
RIPK3-206ENST00000557624 TRIM29Q14134 588 aa16.28■□□□□ 0.2
RIPK3-206ENST00000557624 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
RIPK3-206ENST00000557624 CCDC12Q8WUD4 166 aaPredicted RBP16.28■□□□□ 0.2
RIPK3-206ENST00000557624 EFCC1Q9HA90 598 aa16.28■□□□□ 0.2
RIPK3-206ENST00000557624 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
RIPK3-206ENST00000557624 SLC25A27O95847 323 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 NLRP5P59047 1200 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
RIPK3-206ENST00000557624 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 CLEC4DQ8WXI8 215 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
RIPK3-206ENST00000557624 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
RIPK3-206ENST00000557624 SMCO2A6NFE2 343 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 COPB2P35606 906 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 ADCY7P51828 1080 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 KRT40Q6A162 431 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 NSMFQ6X4W1 530 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 CHST13Q8NET6 341 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 TSKSQ9UJT2 592 aa16.27■□□□□ 0.19
RIPK3-206ENST00000557624 H3BQV1 296 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 OPLAHO14841 1288 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 CFBP00751 764 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 PDCP20941 246 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 SHCBP1Q8NEM2 672 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 CUL5Q93034 780 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 ZMYND12Q9H0C1 365 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 MROH8Q9H579 483 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
RIPK3-206ENST00000557624 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
RIPK3-206ENST00000557624 VPS37CA5D8V6 355 aaPredicted RBP16.25■□□□□ 0.19
RIPK3-206ENST00000557624 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
RIPK3-206ENST00000557624 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
RIPK3-206ENST00000557624 PHF20Q9BVI0 1012 aa16.25■□□□□ 0.19
RIPK3-206ENST00000557624 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
RIPK3-206ENST00000557624 DOCK3Q8IZD9 2030 aa16.25■□□□□ 0.19
RIPK3-206ENST00000557624 ESYT2A0FGR8 921 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 SYT1P21579 422 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 CALML3P27482 149 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 GNA11P29992 359 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 MAPK4P31152 587 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
RIPK3-206ENST00000557624 UBE2SQ16763 222 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 USP17L6PQ6QN14 398 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 MCF2L2Q86YR7 1114 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 ANKRD35Q8N283 1001 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 PLXNB2O15031 1838 aa16.24■□□□□ 0.19
RIPK3-206ENST00000557624 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
RIPK3-206ENST00000557624 GPR25O00155 361 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 ADAMTS3O15072 1205 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 MMP1P03956 469 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 POLR2MP0CAP2 368 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 MRPL12P52815 198 aaKnown RBP16.23■□□□□ 0.19
RIPK3-206ENST00000557624 SP3Q02447 781 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 GPR142Q7Z601 462 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 FAM177A1Q8N128 213 aaPredicted RBP16.23■□□□□ 0.19
RIPK3-206ENST00000557624 RASGRP4Q8TDF6 673 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 MMP19Q99542 508 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 A1CFQ9NQ94 594 aaKnown RBP16.23■□□□□ 0.19
RIPK3-206ENST00000557624 PCDHA4Q9UN74 947 aa16.23■□□□□ 0.19
RIPK3-206ENST00000557624 ZSWIM8A7E2V4 1837 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms