RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-227ENST00000557554 SIP14410 1827 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 LINC01553A4QN01 128 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 ZEB2O60315 1214 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 EDAQ92838 391 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 TGS1Q96RS0 853 aaKnown RBP12.13□□□□□ -0.47
ABCD4-227ENST00000557554 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
ABCD4-227ENST00000557554 AP5M1Q9H0R1 490 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
ABCD4-227ENST00000557554 PDGFCQ9NRA1 345 aa12.13□□□□□ -0.47
ABCD4-227ENST00000557554 NOB1Q9ULX3 412 aaKnown RBP12.13□□□□□ -0.47
ABCD4-227ENST00000557554 RIF1Q5UIP0 2472 aaKnown RBP12.13□□□□□ -0.47
ABCD4-227ENST00000557554 MYH8P13535 1937 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 PURAQ00577 322 aaKnown RBP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 IQSEC1Q6DN90 963 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 PRPF38AQ8NAV1 312 aaKnown RBP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 RAD9AQ99638 391 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 PRRX2Q99811 253 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 FTOQ9C0B1 505 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 DBNLQ9UJU6 430 aaKnown RBP12.12□□□□□ -0.47
ABCD4-227ENST00000557554 MTUS1Q9ULD2 1270 aa12.12□□□□□ -0.47
ABCD4-227ENST00000557554 MAGEB6P1A0A0J9YX57 407 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 GJB5O95377 273 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 GNAI3P08754 354 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 LTBRP36941 435 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 CDK8P49336 464 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 DEFB103AP81534 67 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 CHST13Q8NET6 341 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
ABCD4-227ENST00000557554 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-227ENST00000557554 SLC38A10Q9HBR0 1119 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 RAVER2Q9HCJ3 691 aaKnown RBP12.11□□□□□ -0.47
ABCD4-227ENST00000557554 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 SMC4Q9NTJ3 1288 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
ABCD4-227ENST00000557554 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
ABCD4-227ENST00000557554 SCN10AQ9Y5Y9 1956 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 TANC1Q9C0D5 1861 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 MYO7AQ13402 2215 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 DMDP11532 3685 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 PKN1Q16512 942 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 TCTN1Q2MV58 587 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 ERMP1Q7Z2K6 904 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 RNF135Q8IUD6 432 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
ABCD4-227ENST00000557554 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
ABCD4-227ENST00000557554 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
ABCD4-227ENST00000557554 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
ABCD4-227ENST00000557554 PROB1E7EW31 1015 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 E9PSI1 815 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 KCNJ6P48051 423 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 POLA2Q14181 598 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 SMAD2Q15796 467 aaKnown RBP12.09□□□□□ -0.47
ABCD4-227ENST00000557554 NBPF20Q3BBV1 942 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 TRIM67Q6ZTA4 783 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 PBXIP1Q96AQ6 731 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
ABCD4-227ENST00000557554 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
ABCD4-227ENST00000557554 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 TMEM221A6NGB7 291 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 ASB14A6NK59 587 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 F5H6K3 240 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 M0R296 226 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 ZBED4O75132 1171 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 OAZ1P54368 228 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 KLRC3Q07444 240 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 SLFN5Q08AF3 891 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
ABCD4-227ENST00000557554 DUSP28Q4G0W2 176 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 MORC4Q8TE76 937 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 EAF2Q96CJ1 260 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-227ENST00000557554 C17orf80Q9BSJ5 609 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
ABCD4-227ENST00000557554 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
ABCD4-227ENST00000557554 FAM50BQ9Y247 325 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms