RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CD46P15529 392 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 FAAP100Q0VG06 881 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 MAP3K12Q12852 859 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 TMEM132BQ14DG7 1078 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 SKIV2LQ15477 1246 aaKnown RBP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 TRIM67Q6ZTA4 783 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 ANKRD33Q7Z3H0 272 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 RNF180Q86T96 592 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 SLC44A5Q8NCS7 719 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 TMEM39AQ9NV64 488 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 MCM9Q9NXL9 1143 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 NRBP1Q9UHY1 535 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 NAV1Q8NEY1 1877 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 NCOR1O75376 2440 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 MAGEB6P1A0A0J9YX57 407 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 ADAMTS4O75173 837 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 ZNF865P0CJ78 1059 aaPredicted RBP7.07□□□□□ -1.28
VPS33B-207ENST00000557470 ATP8B2P98198 1209 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 ICA1Q05084 483 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 LAPTM4AQ15012 233 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 ZNF792Q3KQV3 632 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TMED8Q6PL24 325 aaPredicted RBP7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TMEM179Q6ZVK1 233 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TMEM57Q8N5G2 664 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TIFAQ96CG3 184 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 DYNLL2Q96FJ2 89 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TOX2Q96NM4 488 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 MMP19Q99542 508 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 TINF2Q9BSI4 451 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 CRNKL1Q9BZJ0 848 aaKnown RBP7.07□□□□□ -1.28
VPS33B-207ENST00000557470 BCL11AQ9H165 835 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 VCPKMTQ9H867 229 aa7.07□□□□□ -1.28
VPS33B-207ENST00000557470 NOP58Q9Y2X3 529 aaKnown RBP7.07□□□□□ -1.28
VPS33B-207ENST00000557470 SMCHD1A6NHR9 2005 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 SYNRGQ9UMZ2 1314 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 GRXCR1A8MXD5 290 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 DCDC2CA8MYV0 355 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 SMIM22K7EJ46 135 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 NRG2O14511 850 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 SLC25A27O95847 323 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 TIMP1P01033 207 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 AKR1A1P14550 325 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 AKR1B1P15121 316 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 PDE6AP16499 860 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 ACLYP53396 1101 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 KCTD2Q14681 263 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 SLC9C2Q5TAH2 1124 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 CCSAPQ6IQ19 270 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 RNF19BQ6ZMZ0 732 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 C16orf59Q7L2K0 433 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 AACSQ86V21 672 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 RIOX2Q8IUF8 465 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 LCORLQ8N3X6 602 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 SDR42E1Q8WUS8 393 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 TSEN34Q9BSV6 310 aaKnown RBP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 PRDM12Q9H4Q4 367 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 ARHGEF10LQ9HCE6 1279 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-207ENST00000557470 STARD7Q9NQZ5 370 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 FBXO28Q9NVF7 368 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 TBX21Q9UL17 535 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 ADAMTS5Q9UNA0 930 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 CNPY2Q9Y2B0 182 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 TMX2Q9Y320 296 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 REV3LO60673 3130 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 PARP14Q460N5 1801 aa7.06□□□□□ -1.28
VPS33B-207ENST00000557470 ZNF532Q9HCE3 1301 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 MYADML2A6NDP7 307 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 MOXD2PA6NHM9 499 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 VWA5AO00534 786 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 PRKAB2O43741 272 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 CSF2RAP15509 400 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 STAT3P40763 770 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 ADGRE1Q14246 886 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 KCNA10Q16322 511 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 TMEM240Q5SV17 173 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 AKNAD1Q5T1N1 836 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 MFSD5Q6N075 450 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 CCDC129Q6ZRS4 1044 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 KLHDC9Q8NEP7 349 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 REPS2Q8NFH8 660 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 NUP133Q8WUM0 1156 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 ATXN2LQ8WWM7 1075 aaKnown RBP7.05□□□□□ -1.28
VPS33B-207ENST00000557470 HLA-CQ95604 372 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 PBXIP1Q96AQ6 731 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 ASB2Q96Q27 587 aa7.05□□□□□ -1.28
VPS33B-207ENST00000557470 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
VPS33B-207ENST00000557470 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms