RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 HERVK_113P62684 666 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 NEK11Q8NG66 645 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 TBCKQ8TEA7 893 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 CCSER1Q9C0I3 900 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 PSMA7O14818 248 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 OR52Z1P0C646 297 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 NAV1Q8NEY1 1877 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 OR8K1Q8NGG5 319 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 TUBGCP2Q9BSJ2 902 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 TRIM9Q9C026 710 aa19.87■□□□□ 0.77
XRCC3-218ENST00000557439 MYH1P12882 1939 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 ROBO3Q96MS0 1386 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 COL24A1Q17RW2 1714 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 RCCD1A6NED2 376 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 SLURP2P0DP57 97 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 TXKP42681 527 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 RC3H1Q5TC82 1133 aaKnown RBP19.86■□□□□ 0.77
XRCC3-218ENST00000557439 CNBD1Q8NA66 436 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 DAGLBQ8NCG7 672 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 GJA10Q969M2 543 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 COA7Q96BR5 231 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 MMTAG2Q9BU76 263 aaKnown RBP19.86■□□□□ 0.77
XRCC3-218ENST00000557439 UBXN6Q9BZV1 441 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 ZMYND12Q9H0C1 365 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 SLC39A2Q9NP94 309 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 VSNL1P62760 191 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 FAM196AQ6ZSG2 479 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 ZNF804AQ7Z570 1209 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 CEP112Q8N8E3 955 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 PCMTD1Q96MG8 357 aaPredicted RBP19.86■□□□□ 0.77
XRCC3-218ENST00000557439 CD209Q9NNX6 404 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 ABCB6Q9NP58 842 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 TCP11L1Q9NUJ3 509 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 DUSP10Q9Y6W6 482 aa19.86■□□□□ 0.77
XRCC3-218ENST00000557439 PPP4CP60510 307 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 CYP27A1Q02318 531 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 KCNB1Q14721 858 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 NONOQ15233 471 aaKnown RBP eCLIP19.85■□□□□ 0.771e-6■□□□□ 10
XRCC3-218ENST00000557439 MAGEC2Q9UBF1 373 aaPredicted RBP19.85■□□□□ 0.77
XRCC3-218ENST00000557439 BTAF1O14981 1849 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 PICALMQ13492 652 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 LRRC47Q8N1G4 583 aaKnown RBP19.85■□□□□ 0.77
XRCC3-218ENST00000557439 CNOT6LQ96LI5 555 aaKnown RBP19.85■□□□□ 0.77
XRCC3-218ENST00000557439 LACRTQ9GZZ8 138 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 LEMD3Q9Y2U8 911 aa19.85■□□□□ 0.77
XRCC3-218ENST00000557439 ATP1A1P05023 1023 aaKnown RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 TRIM21P19474 475 aaKnown RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 GSTO1P78417 241 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 STIM1Q13586 685 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 TRIM14Q14142 442 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 DYMQ7RTS9 669 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 CAPZA3Q96KX2 299 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 DDX60LQ5H9U9 1706 aaKnown RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 CCDC151A5D8V7 595 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 F8W031 263 aaPredicted RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 N4BP1O75113 896 aaKnown RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 CYP2C19P33261 490 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 AMPD2Q01433 879 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 TBC1D8BQ0IIM8 1120 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 BEND6Q5SZJ8 279 aaPredicted RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 NEK8Q86SG6 692 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 KIAA0895Q8NCT3 520 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 P2RX5Q93086 422 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.84■□□□□ 0.77
XRCC3-218ENST00000557439 MYO6Q9UM54 1294 aa19.84■□□□□ 0.77
XRCC3-218ENST00000557439 CDK5RAP2Q96SN8 1893 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CTAGE15A4D2H0 777 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 PLEKP08567 350 aaPredicted RBP19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CTAGE8P0CG41 777 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 EEF1GP26641 437 aaKnown RBP19.83■□□□□ 0.77
XRCC3-218ENST00000557439 MTIF2P46199 727 aaKnown RBP19.83■□□□□ 0.77
XRCC3-218ENST00000557439 MFSD14BQ5SR56 506 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CCDC122Q5T0U0 273 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 C16orf86Q6ZW13 317 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CTAGE6Q86UF2 777 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CTAGE4Q8IX94 777 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 DNAJC7Q99615 494 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 HINFPQ9BQA5 517 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 THAP9Q9H5L6 903 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 PDE11AQ9HCR9 933 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 CAPN11Q9UMQ6 739 aa19.83■□□□□ 0.77
XRCC3-218ENST00000557439 SLC37A4O43826 429 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 TDP2O95551 362 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 TRAPPC3LQ5T215 181 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 PRR5LQ6MZQ0 368 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 GLIS3Q8NEA6 775 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 RRP36Q96EU6 259 aaKnown RBP19.83■□□□□ 0.76
XRCC3-218ENST00000557439 NUDT12Q9BQG2 462 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 SPZ1Q9BXG8 430 aa19.83■□□□□ 0.76
XRCC3-218ENST00000557439 POTEMA6NI47 508 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 RHBDL3P58872 404 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 ATP2B2Q01814 1243 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 KRT26Q7Z3Y9 468 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 RPGRQ92834 1020 aaKnown RBP19.82■□□□□ 0.76
XRCC3-218ENST00000557439 SEMA6BQ9H3T3 888 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 C6orf50Q9HD87 102 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
XRCC3-218ENST00000557439 LDHCP07864 332 aa19.82■□□□□ 0.76
XRCC3-218ENST00000557439 SRGNP10124 158 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms