RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 MX1P20591 662 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 FSCN1Q16658 493 aaKnown RBP20.25■□□□□ 0.83
NEDD1-210ENST00000557400 ZNF365Q70YC5 407 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 SLC43A3Q8NBI5 491 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 AP5M1Q9H0R1 490 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 IL17RBQ9NRM6 502 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 CYP39A1Q9NYL5 469 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
NEDD1-210ENST00000557400 NMT2O60551 498 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 ACRP10323 421 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 CYP2C18P33260 490 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 SNAP25P60880 206 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 CTDSPL2Q05D32 466 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
NEDD1-210ENST00000557400 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 ZEB2O60315 1214 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 SMPD1P17405 629 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 PBX2P40425 430 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 ITGA7Q13683 1181 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 IQSEC1Q6DN90 963 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 RASGRP2Q7LDG7 609 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 SYMPKQ92797 1274 aaKnown RBP20.23■□□□□ 0.83
NEDD1-210ENST00000557400 SEZ6LQ9BYH1 1024 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 HIPK3Q9H422 1215 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 IL23AQ9NPF7 189 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 INCENPQ9NQS7 918 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 CCPG1Q9ULG6 757 aa20.23■□□□□ 0.83
NEDD1-210ENST00000557400 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
NEDD1-210ENST00000557400 GRXCR1A8MXD5 290 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 DYNC1LI2O43237 492 aaPredicted RBP20.22■□□□□ 0.83
NEDD1-210ENST00000557400 RANBP6O60518 1105 aaKnown RBP20.22■□□□□ 0.83
NEDD1-210ENST00000557400 NOVP48745 357 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 NSMFQ6X4W1 530 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 FBXO16Q8IX29 292 aaPredicted RBP20.22■□□□□ 0.83
NEDD1-210ENST00000557400 HERVK_113Q902F9 699 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 MTIF3Q9H2K0 278 aaKnown RBP20.22■□□□□ 0.83
NEDD1-210ENST00000557400 PDGFCQ9NRA1 345 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 Q9Y3F1 56 aa20.22■□□□□ 0.83
NEDD1-210ENST00000557400 ICAM1P05362 532 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 PTGS1P23219 599 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 TAPT1Q6NXT6 567 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 EEPD1Q7L9B9 569 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 DCAF4Q8WV16 495 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 GAS2L1Q99501 681 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-210ENST00000557400 VTA1Q9NP79 307 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 MTMR7Q9Y216 660 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 GRIN2DO15399 1336 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
NEDD1-210ENST00000557400 ORC4O43929 436 aa20.2■□□□□ 0.82
NEDD1-210ENST00000557400 RAB30Q15771 203 aa20.2■□□□□ 0.82
NEDD1-210ENST00000557400 MORC4Q8TE76 937 aa20.2■□□□□ 0.82
NEDD1-210ENST00000557400 RANBP17Q9H2T7 1088 aaKnown RBP20.2■□□□□ 0.82
NEDD1-210ENST00000557400 UMODL1Q5DID0 1318 aa20.2■□□□□ 0.82
NEDD1-210ENST00000557400 FGBP02675 491 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 FGRP09769 529 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 ALX1Q15699 326 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 TJAP1Q5JTD0 557 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 BTNL9Q6UXG8 535 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 PURBQ96QR8 312 aaKnown RBP20.19■□□□□ 0.82
NEDD1-210ENST00000557400 NOC4LQ9BVI4 516 aaKnown RBP20.19■□□□□ 0.82
NEDD1-210ENST00000557400 TRPV6Q9H1D0 765 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 CXXC1Q9P0U4 656 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-210ENST00000557400 ADD3Q9UEY8 706 aaKnown RBP20.19■□□□□ 0.82
NEDD1-210ENST00000557400 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-210ENST00000557400 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
NEDD1-210ENST00000557400 B4GALT4O60513 344 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 SLC16A2P36021 539 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 PSMC6P62333 389 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 TMEM63BQ5T3F8 832 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 SYDE2Q5VT97 1194 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 TTBK2Q6IQ55 1244 aa20.18■□□□□ 0.82
NEDD1-210ENST00000557400 SPTBN5Q9NRC6 3674 aaKnown RBP20.17■□□□□ 0.82
NEDD1-210ENST00000557400 MCM3APO60318 1980 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 LOC102724159A0A0B4J2E5 919 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 TOP1P11387 765 aaKnown RBP20.17■□□□□ 0.82
NEDD1-210ENST00000557400 CCL23P55773 120 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 BAATQ14032 418 aaPredicted RBP20.17■□□□□ 0.82
NEDD1-210ENST00000557400 PWP2Q15269 919 aaKnown RBP20.17■□□□□ 0.82
NEDD1-210ENST00000557400 DUSP28Q4G0W2 176 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 AKNAD1Q5T1N1 836 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 OTOP2Q7RTS6 562 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
NEDD1-210ENST00000557400 NFIBO00712 420 aa20.16■□□□□ 0.82
NEDD1-210ENST00000557400 ALDH5A1P51649 535 aaPredicted RBP20.16■□□□□ 0.82
NEDD1-210ENST00000557400 TMEM47Q9BQJ4 181 aa20.16■□□□□ 0.82
NEDD1-210ENST00000557400 WNT8AQ9H1J5 351 aa20.16■□□□□ 0.82
NEDD1-210ENST00000557400 ALDH8A1Q9H2A2 487 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms