RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TRIM27P14373 513 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 TMEM245Q9H330 911 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 AZI2Q9H6S1 392 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 RWDD2BP57060 319 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 POSTNQ15063 836 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 BATF3Q9NR55 127 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 AOX1Q06278 1338 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ZNF75DP51815 510 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 PROCA1Q8NCQ7 364 aaPredicted RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CUEDC2Q9H467 287 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 SLC8A2Q9UPR5 921 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 IFNB1P01574 187 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 FANCCQ00597 558 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 IL1RL1Q01638 556 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ADCY2Q08462 1091 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 RAPH1Q70E73 1250 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 LUZP2Q86TE4 346 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 OR8K1Q8NGG5 319 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CCNT1O60563 726 aaKnown RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 HLA-DPA1P20036 260 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 TAC1P20366 129 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 LIG3P49916 1009 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CLSTN2Q9H4D0 955 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 SRGAP2CP0DJJ0 459 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 TMED10P49755 219 aaKnown RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 TERB1Q8NA31 727 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ATP6V1E2Q96A05 226 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 JPH2Q9BR39 696 aaPredicted RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 SNAPC4Q5SXM2 1469 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CHUKO15111 745 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CCDC15Q0P6D6 951 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 NDEL1Q9GZM8 345 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 IQANK1A0A1B0GTG1 560 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ZNF445P59923 1031 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 IFT88Q13099 833 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 CNBD2Q96M20 576 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 NUDCD1Q96RS6 583 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 SYBUQ9NX95 663 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 MAFGO15525 162 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 GUCY2CP25092 1073 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 ANKRD42Q8N9B4 389 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 DDX28Q9NUL7 540 aaKnown RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 TRPA1O75762 1119 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 PTK2BQ14289 1009 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 HSP90AA4PQ58FG1 418 aa9.58□□□□□ -0.88
SYNE3-205ENST00000557275 RBM8AQ9Y5S9 174 aaKnown RBP9.58□□□□□ -0.88
SYNE3-205ENST00000557275 C16orf96A6NNT2 1141 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 EXOC3O60645 756 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 WDR47O94967 919 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 EIF2S1P05198 315 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 STAT2P52630 851 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 STX3Q13277 289 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 RCN2Q14257 317 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TLK1Q9UKI8 766 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 NLRP12P59046 1061 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TTC6Q86TZ1 520 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 MTRF1O75570 445 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 HESX1Q9UBX0 185 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 ADCY3O60266 1144 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 MAGEA9P43362 315 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TRMT10CQ7L0Y3 403 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 CRLF3Q8IUI8 442 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 RUBCNQ92622 972 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 MAML3Q96JK9 1138 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 ZNF229Q9UJW7 825 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 DAB2P98082 770 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 GRAMD1BQ3KR37 738 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 H0YC42 278 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 HSPA1AP0DMV8 641 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 HSPA1BP0DMV9 641 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 HGSO14964 777 aaPredicted RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 XPOTO43592 962 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 KAZNQ674X7 775 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 NDUFAF2Q8N183 169 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 CFAP36Q96G28 342 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 L3MBTL1Q9Y468 752 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 CFAP73A6NFT4 308 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 SNTNA6NMZ2 147 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 E2F6O75461 281 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 CYP7A1P22680 504 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TRMT1LQ7Z2T5 733 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 COPB1P53618 953 aaKnown RBP9.57□□□□□ -0.88
SYNE3-205ENST00000557275 DRP2Q13474 957 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 TIAM1Q13009 1591 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 GCNT3O95395 438 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 KLHL7Q8IXQ5 586 aa9.57□□□□□ -0.88
SYNE3-205ENST00000557275 RSPH1Q8WYR4 309 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms