RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 FGBP02675 491 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 MYOGP15173 224 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 FAM83BQ5T0W9 1011 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-219ENST00000556951 AACSQ86V21 672 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
PSEN1-219ENST00000556951 KATNBL1Q9H079 304 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 MTIF3Q9H2K0 278 aaKnown RBP15.17■□□□□ 0.02
PSEN1-219ENST00000556951 FAM86C1Q9NVL1 165 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 ZHX1Q9UKY1 873 aaPredicted RBP15.17■□□□□ 0.02
PSEN1-219ENST00000556951 PCDHA11Q9Y5I1 949 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
PSEN1-219ENST00000556951 DMDP11532 3685 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 C6orf222P0C671 652 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-219ENST00000556951 COPB2P35606 906 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.16■□□□□ 0.02
PSEN1-219ENST00000556951 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-219ENST00000556951 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 ASTN1O14525 1302 aa15.16■□□□□ 0.02
PSEN1-219ENST00000556951 TPRP12270 2363 aaKnown RBP15.16■□□□□ 0.02
PSEN1-219ENST00000556951 EPOPA6NHQ4 379 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 USP17L21D6R901 530 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 CHGBP05060 677 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 IL9P15248 144 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 TTF1Q15361 905 aaPredicted RBP15.15■□□□□ 0.02
PSEN1-219ENST00000556951 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 DDX11Q96FC9 970 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
PSEN1-219ENST00000556951 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
PSEN1-219ENST00000556951 TECTAO75443 2155 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 MED19A0JLT2 244 aaPredicted RBP15.14■□□□□ 0.01
PSEN1-219ENST00000556951 APBB1O00213 710 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 GOLIM4O00461 696 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 BEX3Q00994 111 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 LEXMQ3ZCV2 418 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
PSEN1-219ENST00000556951 OTOP2Q7RTS6 562 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 ERC1Q8IUD2 1116 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.14■□□□□ 0.01
PSEN1-219ENST00000556951 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 ABHD16BQ9H3Z7 469 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 KMT2EQ8IZD2 1858 aa15.14■□□□□ 0.01
PSEN1-219ENST00000556951 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 TLR3O15455 904 aaKnown RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 KIF1BPQ96EK5 621 aa15.13■□□□□ 0.01
PSEN1-219ENST00000556951 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
PSEN1-219ENST00000556951 NOC4LQ9BVI4 516 aaKnown RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 WNT8AQ9H1J5 351 aa15.13■□□□□ 0.01
PSEN1-219ENST00000556951 UBE2ZQ9H832 354 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-219ENST00000556951 CERS4Q9HA82 394 aa15.13■□□□□ 0.01
PSEN1-219ENST00000556951 GOPCQ9HD26 462 aa15.13■□□□□ 0.01
PSEN1-219ENST00000556951 BAZ2AQ9UIF9 1905 aaKnown RBP15.12■□□□□ 0.01
PSEN1-219ENST00000556951 MBD4O95243 580 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 PTGS1P23219 599 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 ADD2P35612 726 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 CCL23P55773 120 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 CTR9Q6PD62 1173 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 CXCL17Q6UXB2 119 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 ARMCX2Q7L311 632 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 CNTNAP3BQ96NU0 1288 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 CNTNAP3Q9BZ76 1288 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 TRPV6Q9H1D0 765 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 MCM3APO60318 1980 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 WDR87Q6ZQQ6 2873 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 DNAH14Q0VDD8 3507 aa15.12■□□□□ 0.01
PSEN1-219ENST00000556951 F5H6K3 240 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 CNTN2Q02246 1040 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 KLRC3Q07444 240 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 ASCL5Q7RTU5 278 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 BMP8AQ7Z5Y6 402 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 PLEKHM2Q8IWE5 1019 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 CPXCR1Q8N123 301 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 PRPF38AQ8NAV1 312 aaKnown RBP15.11■□□□□ 0.01
PSEN1-219ENST00000556951 AGBL1Q96MI9 1066 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 SPC25Q9HBM1 224 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
PSEN1-219ENST00000556951 TSHZ2Q9NRE2 1034 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 NYAP2Q9P242 653 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
PSEN1-219ENST00000556951 COL4A4P53420 1690 aaPredicted RBP15.11■□□□□ 0.01
PSEN1-219ENST00000556951 NCOR2Q9Y618 2525 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 MYH8P13535 1937 aa15.11■□□□□ 0.01
PSEN1-219ENST00000556951 COL4A6Q14031 1691 aa15.1■□□□□ 0.01
PSEN1-219ENST00000556951 DMXL1Q9Y485 3027 aa15.1■□□□□ 0.01
PSEN1-219ENST00000556951 PROB1E7EW31 1015 aa15.1■□□□□ 0.01
PSEN1-219ENST00000556951 NDUFB10O96000 172 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms