RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 KRT32Q14532 448 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 GPR162Q16538 588 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 LRRFIP1Q32MZ4 808 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 ZSCAN23Q3MJ62 389 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 CCNJLQ8IV13 435 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 DNAAF4Q8WXU2 420 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 EVI5LQ96CN4 794 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 TMX3Q96JJ7 454 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 ASB16Q96NS5 453 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 NAP1L5Q96NT1 182 aaPredicted RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 CSRNP1Q96S65 589 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 NIF3L1Q9GZT8 377 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 C9orf78Q9NZ63 289 aaPredicted RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 BIN2Q9UBW5 565 aaPredicted RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 SRP68Q9UHB9 627 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 LIMCH1Q9UPQ0 1083 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 USP42Q9H9J4 1324 aaKnown RBP7.23□□□□□ -1.25
CPSF2-205ENST00000556622 LRP5O75197 1615 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 PAPPAQ13219 1627 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 CASZ1Q86V15 1759 aa7.23□□□□□ -1.25
CPSF2-205ENST00000556622 HEG1Q9ULI3 1381 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 PRR19A6NJB7 356 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 SRGAP3O43295 1099 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 PRPF40AO75400 957 aaKnown RBP7.22□□□□□ -1.25
CPSF2-205ENST00000556622 TRPA1O75762 1119 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 GYS1P13807 737 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 DHX8Q14562 1220 aaKnown RBP7.22□□□□□ -1.25
CPSF2-205ENST00000556622 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 VN1R5Q7Z5H4 357 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 ARMC10Q8N2F6 343 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 GALNT11Q8NCW6 608 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 TCF12Q99081 682 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 USP44Q9H0E7 712 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 OSGEPQ9NPF4 335 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 LATS2Q9NRM7 1088 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 ECHDC1Q9NTX5 307 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 LMBRD1Q9NUN5 540 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 HMG20BQ9P0W2 317 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 ZBTB1Q9Y2K1 713 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 CD2APQ9Y5K6 639 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
CPSF2-205ENST00000556622 N4BP2Q86UW6 1770 aaPredicted RBP7.22□□□□□ -1.25
CPSF2-205ENST00000556622 MYH14Q7Z406 1995 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 PRAMEF22A3QJZ6 481 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 H3BRJ5 948 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 LINC01387J3KSC0 135 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 FSCN2O14926 492 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 PIP4K2AP48426 406 aaPredicted RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 EIF5P55010 431 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 EIF4A1P60842 406 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 HMGN5P82970 282 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 PLCB3Q01970 1234 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 G3BP1Q13283 466 aaKnown RBP eCLIP7.21□□□□□ -1.263e-6■■■□□ 15.1
CPSF2-205ENST00000556622 CAVIN1Q6NZI2 390 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 KSR2Q6VAB6 950 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 C16orf71Q8IYS4 520 aaPredicted RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 CCDC74AQ96AQ1 378 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 ALDH8A1Q9H2A2 487 aaPredicted RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 TSPY26PQ9H489 355 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 SOX17Q9H6I2 414 aaPredicted RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 NARFQ9UHQ1 456 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 NOL7Q9UMY1 257 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 SMC3Q9UQE7 1217 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 EXOC6BQ9Y2D4 811 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 LRRFIP2Q9Y608 721 aaKnown RBP7.21□□□□□ -1.26
CPSF2-205ENST00000556622 SALL3Q9BXA9 1300 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 QSER1Q2KHR3 1735 aa7.21□□□□□ -1.26
CPSF2-205ENST00000556622 TUBGCP6Q96RT7 1819 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 UBR3Q6ZT12 1888 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 SGSM2O43147 1006 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 SMARCA5O60264 1052 aaPredicted RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 ZNF500O60304 480 aaPredicted RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 WNT11O96014 354 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 POLR3DP05423 398 aaPredicted RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 C8AP07357 584 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 EIF2S2P20042 333 aaKnown RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 MAPK1P28482 360 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 TM4SF1P30408 202 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 IL6STP40189 918 aaPredicted RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 KCNJ4P48050 445 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 UBE2HP62256 183 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 PTPN12Q05209 780 aaKnown RBP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 NFIAQ12857 509 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 CCDC183Q5T5S1 534 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPSF2-205ENST00000556622 PPP1R42Q7Z4L9 355 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 NLGN2Q8NFZ4 835 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 RFX7Q2KHR2 1363 aa7.2□□□□□ -1.26
CPSF2-205ENST00000556622 MRC1P22897 1456 aa7.19□□□□□ -1.26
CPSF2-205ENST00000556622 GOLGA6L4A6NEF3 574 aa7.19□□□□□ -1.26
CPSF2-205ENST00000556622 OFD1O75665 1012 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms