RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
CRX-203ENST00000556527 PRDM12Q9H4Q4 367 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 IL23AQ9NPF7 189 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 PRDM6Q9NQX0 595 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 CCPG1Q9ULG6 757 aa11.6□□□□□ -0.55
CRX-203ENST00000556527 PLIN4Q96Q06 1357 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 GRXCR1A8MXD5 290 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 RANBP6O60518 1105 aaKnown RBP11.59□□□□□ -0.55
CRX-203ENST00000556527 PBX2P40425 430 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 ITGA7Q13683 1181 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 IQSEC1Q6DN90 963 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 KCTD1Q719H9 257 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
CRX-203ENST00000556527 FGD4Q96M96 766 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 MPHOSPH6Q99547 160 aaKnown RBP11.59□□□□□ -0.55
CRX-203ENST00000556527 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
CRX-203ENST00000556527 THEGQ9P2T0 379 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 ADD3Q9UEY8 706 aaKnown RBP11.59□□□□□ -0.55
CRX-203ENST00000556527 EYSQ5T1H1 3165 aa11.59□□□□□ -0.55
CRX-203ENST00000556527 GREB1LQ9C091 1923 aaPredicted RBP11.58□□□□□ -0.55
CRX-203ENST00000556527 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 SOWAHBA6NEL2 793 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 ZBBXA8MT70 800 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 TNFRSF10AO00220 468 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 CCL23P55773 120 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 BRDTQ58F21 947 aaPredicted RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 AKNAD1Q5T1N1 836 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 OTOP2Q7RTS6 562 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 FBXO16Q8IX29 292 aaPredicted RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 HERVK_113Q902F9 699 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.56
CRX-203ENST00000556527 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 SLC4A7Q9Y6M7 1214 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 RAD50Q92878 1312 aa11.58□□□□□ -0.56
CRX-203ENST00000556527 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 PLA2G6O60733 806 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 CD4P01730 458 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 SMPD1P17405 629 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 CPT1AP50416 773 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 SNAP25P60880 206 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 NKX3-2P78367 333 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 RASIP1Q5U651 963 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 KATNBL1Q9H079 304 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 CYP39A1Q9NYL5 469 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
CRX-203ENST00000556527 Q9Y3F1 56 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 ZNF536O15090 1300 aa11.57□□□□□ -0.56
CRX-203ENST00000556527 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 CTAGE5O15320 804 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 B4GALT4O60513 344 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 ICAM1P05362 532 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 MX1P20591 662 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 PSMC6P62333 389 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 MRPS5P82675 430 aaKnown RBP11.56□□□□□ -0.56
CRX-203ENST00000556527 CTDSPL2Q05D32 466 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 MUM1L1Q5H9M0 696 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
CRX-203ENST00000556527 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 SLC43A3Q8NBI5 491 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 PRUNE2Q8WUY3 3088 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 DCAF4Q8WV16 495 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 NOC4LQ9BVI4 516 aaKnown RBP11.56□□□□□ -0.56
CRX-203ENST00000556527 NKX2-4Q9H2Z4 354 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 PDGFCQ9NRA1 345 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 PNMA2Q9UL42 364 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 ASTN1O14525 1302 aa11.56□□□□□ -0.56
CRX-203ENST00000556527 B4DLN1 442 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 NMT2O60551 498 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 PFKMP08237 780 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 MYL3P08590 195 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 ACTN1P12814 892 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 ATP2A2P16615 1042 aaKnown RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 PDE4DQ08499 809 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 ASB2Q96Q27 587 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 WDR11Q9BZH6 1224 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 ALDH8A1Q9H2A2 487 aaPredicted RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
CRX-203ENST00000556527 VCANP13611 3396 aa11.55□□□□□ -0.56
CRX-203ENST00000556527 UMODL1Q5DID0 1318 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms