RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 LTBP3Q9NS15 1303 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 IRS2Q9Y4H2 1338 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 CBFA2T2O43439 604 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 SASH1O94885 1247 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 DBHP09172 617 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 ITGA4P13612 1032 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-217ENST00000555953 NFIXQ14938 502 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 NR1I3Q14994 352 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 ZC3H14Q6PJT7 736 aaKnown RBP7.09□□□□□ -1.27
SCFD1-217ENST00000555953 CCDC81Q6ZN84 652 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 ZDHHC15Q96MV8 337 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 PTCHD1Q96NR3 888 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 NOL6Q9H6R4 1146 aaKnown RBP7.09□□□□□ -1.27
SCFD1-217ENST00000555953 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 SF3B6Q9Y3B4 125 aaKnown RBP7.09□□□□□ -1.27
SCFD1-217ENST00000555953 HCFC2Q9Y5Z7 792 aa7.09□□□□□ -1.27
SCFD1-217ENST00000555953 SRGAP3O43295 1099 aa7.08□□□□□ -1.28
SCFD1-217ENST00000555953 CD3EP07766 207 aa7.08□□□□□ -1.28
SCFD1-217ENST00000555953 IGFBP6P24592 240 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-217ENST00000555953 NOP2P46087 812 aaKnown RBP7.08□□□□□ -1.28
SCFD1-217ENST00000555953 SYT8Q8NBV8 401 aa7.08□□□□□ -1.28
SCFD1-217ENST00000555953 PDLIM7Q9NR12 457 aa7.08□□□□□ -1.28
SCFD1-217ENST00000555953 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
SCFD1-217ENST00000555953 RECKO95980 971 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 CYBBP04839 570 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 FBLN1P23142 703 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 TACR1P25103 407 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 LIMS1P48059 325 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 PAK2Q13177 524 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 BICRALQ6AI39 1079 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 PAQR3Q6TCH7 311 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 LINC01356Q8N9X3 169 aa7.07□□□□□ -1.28
SCFD1-217ENST00000555953 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-217ENST00000555953 A0A087WZG4 1122 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 POU4F1Q01851 419 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 PPP2R5DQ14738 602 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 TCEAL1Q15170 157 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 SP8Q8IXZ3 490 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 ZDHHC14Q8IZN3 488 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 ADCY4Q8NFM4 1077 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 HAUS7Q99871 368 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
SCFD1-217ENST00000555953 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 A0A1W2PQJ5 194 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 FFAR3O14843 346 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 SYN1P17600 705 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 CORO7P57737 925 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 KLHL25Q9H0H3 589 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 LUC7LQ9NQ29 371 aaKnown RBP7.05□□□□□ -1.28
SCFD1-217ENST00000555953 EFR3BQ9Y2G0 817 aa7.05□□□□□ -1.28
SCFD1-217ENST00000555953 DIS3Q9Y2L1 958 aaKnown RBP7.05□□□□□ -1.28
SCFD1-217ENST00000555953 TBC1D8O95759 1140 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 PFKLP17858 780 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 L1CAMP32004 1257 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 SOX9P48436 509 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 PRR5P85299 388 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-217ENST00000555953 RCSD1Q6JBY9 416 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 METTL16Q86W50 562 aaKnown RBP7.04□□□□□ -1.28
SCFD1-217ENST00000555953 ZNF654Q8IZM8 581 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 NLGN2Q8NFZ4 835 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 CXorf38Q8TB03 319 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 CRBNQ96SW2 442 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 WHRNQ9P202 907 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 PCDHB10Q9UN67 800 aa7.04□□□□□ -1.28
SCFD1-217ENST00000555953 ZC3H12DA2A288 527 aaKnown RBP7.03□□□□□ -1.28
SCFD1-217ENST00000555953 F8W031 263 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-217ENST00000555953 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
SCFD1-217ENST00000555953 AURKAO14965 403 aa7.03□□□□□ -1.28
SCFD1-217ENST00000555953 ATF2P15336 505 aa7.03□□□□□ -1.28
SCFD1-217ENST00000555953 MFAP1P55081 439 aaKnown RBP7.03□□□□□ -1.28
SCFD1-217ENST00000555953 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
SCFD1-217ENST00000555953 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
SCFD1-217ENST00000555953 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
SCFD1-217ENST00000555953 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 STXBP3O00186 592 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 PLA2G1BP04054 148 aaKnown RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 EPHX1P07099 455 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 GIPRP48546 466 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 EIF6P56537 245 aaKnown RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 CAP1Q01518 475 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 SKOR2Q2VWA4 1001 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 VWA3BQ502W6 1294 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 C19orf47Q8N9M1 422 aaKnown RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 ADAM7Q9H2U9 754 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 PHAXQ9H814 394 aaKnown RBP7.02□□□□□ -1.29
SCFD1-217ENST00000555953 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
SCFD1-217ENST00000555953 VAMP4O75379 141 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 GLI4P10075 376 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 VAMP1P23763 118 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 FOXO4P98177 505 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 SLC7A5Q01650 507 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 DPY19L1Q2PZI1 675 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
SCFD1-217ENST00000555953 KLHL6Q8WZ60 621 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms