RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 SDSP20132 328 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 MAP2K2P36507 400 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 FKBP1AP62942 108 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 KBTBD3Q8NAB2 608 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 ALKBH8Q96BT7 664 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 ANTXR1Q9H6X2 564 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 C11orf16Q9NQ32 467 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 PIH1D3Q9NQM4 214 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 PHF24Q9UPV7 400 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 SUGT1Q9Y2Z0 365 aa9.15□□□□□ -0.94
SUPT16H-204ENST00000555943 A0A1B0GUL6 1792 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 MAST3O60307 1309 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 F8W031 263 aaPredicted RBP9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 H3BM21 787 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 CA12O43570 354 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 LDHCP07864 332 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 HSPA8P11142 646 aaKnown RBP9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 FGFR3P22607 806 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 MMP14P50281 582 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 GSTO1P78417 241 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.956e-13■■■■■ 47.6
SUPT16H-204ENST00000555943 DACT2Q5SW24 774 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 SLC9C2Q5TAH2 1124 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 CST9Q5W186 159 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 XKR5Q6UX68 686 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 SAPCD2Q86UD0 394 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 CAPNS2Q96L46 248 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 NOL10Q9BSC4 688 aaKnown RBP9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 HDAC9Q9UKV0 1011 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 ARAP2Q8WZ64 1704 aa9.14□□□□□ -0.95
SUPT16H-204ENST00000555943 RNF113AO15541 343 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 CDC45O75419 566 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 CELF2O95319 508 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 ZFYP08048 801 aaPredicted RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 VIL1P09327 827 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 PRDX5P30044 214 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 CTBSQ01459 385 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 SPEM2Q0P670 501 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 CCINQ13939 588 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 NAA16Q6N069 864 aaPredicted RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 TMED8Q6PL24 325 aaPredicted RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 TICAM2Q86XR7 235 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 KIAA0825Q8IV33 1275 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 MAGEB6Q8N7X4 407 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 AGBL3Q8NEM8 1001 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 RUFY2Q8WXA3 655 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 DCPSQ96C86 337 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 SLC30A3Q99726 388 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 MXD3Q9BW11 206 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 TTF2Q9UNY4 1162 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-204ENST00000555943 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 TRAF5O00463 557 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 SASH3O75995 380 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 CYP7A1P22680 504 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 MECOMQ03112 1051 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 ORC1Q13415 861 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 UBE3CQ15386 1083 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 KRT25Q7Z3Z0 450 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 GLIS2Q9BZE0 524 aaPredicted RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 FOXD3Q9UJU5 478 aaPredicted RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 COL1A1P02452 1464 aaPredicted RBP9.12□□□□□ -0.95
SUPT16H-204ENST00000555943 ZNF532Q9HCE3 1301 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 EIF5BO60841 1220 aaKnown RBP9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 TNFRSF21O75509 655 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 BAG3O95817 575 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 PDE6AP16499 860 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 TARSP26639 723 aaKnown RBP9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 ADD2P35612 726 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 NOGQ13253 232 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 CYP4F22Q6NT55 531 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 CWC27Q6UX04 472 aaKnown RBP9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 KRT26Q7Z3Y9 468 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 NSUN4Q96CB9 384 aaKnown RBP9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 RFX7Q2KHR2 1363 aa9.11□□□□□ -0.95
SUPT16H-204ENST00000555943 PITPNM2Q9BZ72 1349 aa9.1□□□□□ -0.95
SUPT16H-204ENST00000555943 CCDC85CA6NKD9 419 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms