RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 RANBP17Q9H2T7 1088 aaKnown RBP13.57□□□□□ -0.24
LRP1-209ENST00000555941 TOMM22Q9NS69 142 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 CYP39A1Q9NYL5 469 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 TBX21Q9UL17 535 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
LRP1-209ENST00000555941 MYADML2A6NDP7 307 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 ADCY6O43306 1168 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 ZEB2O60315 1214 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 MORC4Q8TE76 937 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 RNPC3Q96LT9 517 aaKnown RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 RNF41Q9H4P4 317 aaPredicted RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 VTA1Q9NP79 307 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 ADD3Q9UEY8 706 aaKnown RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
LRP1-209ENST00000555941 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
LRP1-209ENST00000555941 CTAGE5O15320 804 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 NMIQ13287 307 aaPredicted RBP13.55□□□□□ -0.24
LRP1-209ENST00000555941 PPIGQ13427 754 aaKnown RBP eCLIP13.55□□□□□ -0.241e-15■□□□□ 10.2
LRP1-209ENST00000555941 MUM1L1Q5H9M0 696 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
LRP1-209ENST00000555941 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 SYDE2Q5VT97 1194 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 OSBPL3Q9H4L5 887 aa13.55□□□□□ -0.24
LRP1-209ENST00000555941 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.54□□□□□ -0.24
LRP1-209ENST00000555941 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.54□□□□□ -0.24
LRP1-209ENST00000555941 EPHB4P54760 987 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 FSCN1Q16658 493 aaKnown RBP13.54□□□□□ -0.24
LRP1-209ENST00000555941 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 TLK2Q86UE8 772 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 FAM126BQ8IXS8 530 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 MAF1Q9H063 256 aa13.54□□□□□ -0.24
LRP1-209ENST00000555941 CUL9Q8IWT3 2517 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 HIP1O00291 1037 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 CD4P01730 458 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 PDHBP11177 359 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 SMPD1P17405 629 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 SDSP20132 328 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 SLC16A2P36021 539 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 SNAP25P60880 206 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
LRP1-209ENST00000555941 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
LRP1-209ENST00000555941 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 DGKHQ86XP1 1220 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 ESR2Q92731 530 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
LRP1-209ENST00000555941 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
LRP1-209ENST00000555941 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 ASTN1O14525 1302 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 WDR19Q8NEZ3 1342 aa13.53□□□□□ -0.24
LRP1-209ENST00000555941 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
LRP1-209ENST00000555941 B4DLN1 442 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 ZNF213O14771 459 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
LRP1-209ENST00000555941 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
LRP1-209ENST00000555941 HAND2P61296 217 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 BEX3Q00994 111 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 NUCB1Q02818 461 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 ZNF543Q08ER8 600 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
LRP1-209ENST00000555941 DUSP28Q4G0W2 176 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.25
LRP1-209ENST00000555941 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 LRRC37A2A6NM11 1700 aa13.52□□□□□ -0.25
LRP1-209ENST00000555941 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
LRP1-209ENST00000555941 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
LRP1-209ENST00000555941 ALDH5A1P51649 535 aaPredicted RBP13.51□□□□□ -0.25
LRP1-209ENST00000555941 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
LRP1-209ENST00000555941 PSRC1Q6PGN9 363 aaPredicted RBP13.51□□□□□ -0.25
LRP1-209ENST00000555941 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
LRP1-209ENST00000555941 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
LRP1-209ENST00000555941 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
LRP1-209ENST00000555941 IQCA1Q86XH1 822 aa13.51□□□□□ -0.25
LRP1-209ENST00000555941 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
LRP1-209ENST00000555941 FBXO16Q8IX29 292 aaPredicted RBP13.51□□□□□ -0.25
LRP1-209ENST00000555941 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms