RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 TRAK2O60296 914 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 ZBED4O75132 1171 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 FKBP1BP68106 108 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 PPIL2Q13356 520 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 EARS2Q5JPH6 523 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 JAKMIP3Q5VZ66 844 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 REXO1Q8N1G1 1221 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 CUL5Q93034 780 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 OPTNQ96CV9 577 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 GLT8D2Q9H1C3 349 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 PSTPIP2Q9H939 334 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 RIC8AQ9NPQ8 531 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 RCOR1Q9UKL0 485 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 PTPRFP10586 1907 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 ELP1O95163 1332 aa11.05□□□□□ -0.64
HNRNPC-220ENST00000555585 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 CXCL11O14625 94 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 IRF6O14896 467 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 YEATS4O95619 227 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 C7P10643 843 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 TAL1P17542 331 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 UBE2HP62256 183 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 UBE2SQ16763 222 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 CATSPERGQ6ZRH7 1159 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 PARP14Q460N5 1801 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 ABCB11O95342 1321 aa11.04□□□□□ -0.64
HNRNPC-220ENST00000555585 LOC285556D6RIA3 1793 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 A0A0G2JLL6 359 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 M0R2N6 131 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 SPTLC2O15270 562 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 MBD3O95983 291 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 FDX1P10109 184 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 ME1P48163 572 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 COG2Q14746 738 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 NONOQ15233 471 aaKnown RBP eCLIP11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 ZNF174Q15697 407 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 INF2Q27J81 1249 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 TTC38Q5R3I4 469 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 PRRT2Q7Z6L0 340 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 CPXCR1Q8N123 301 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 LINC00301Q8NCQ3 95 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 RAVER2Q9HCJ3 691 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 MRPL11Q9Y3B7 192 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
HNRNPC-220ENST00000555585 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 ICAM1P05362 532 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 ALAS1P13196 640 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 MARCKSP29966 332 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 TRAPPC10P48553 1259 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 GPT2Q8TD30 523 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 HOXC10Q9NYD6 342 aa11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 COL11A1P12107 1806 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-220ENST00000555585 VWA5AO00534 786 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 PPP6R2O75170 966 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 BMP15O95972 392 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 CFBP00751 764 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 MCM7P33993 719 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 GJA5P36382 358 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 ATN1P54259 1190 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 IRX3P78415 501 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 SNAPC2Q13487 334 aa11.01□□□□□ -0.65
HNRNPC-220ENST00000555585 PTPAQ15257 358 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms