RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 AKR1B1P15121 316 aa26.74■■□□□ 1.87
STRN3-207ENST00000555358 CCDC12Q8WUD4 166 aaPredicted RBP26.74■■□□□ 1.87
STRN3-207ENST00000555358 NAA15Q9BXJ9 866 aaKnown RBP26.74■■□□□ 1.87
STRN3-207ENST00000555358 FER1L6Q2WGJ9 1857 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 CCDC66A2RUB6 948 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 DDTLA6NHG4 134 aaPredicted RBP26.73■■□□□ 1.87
STRN3-207ENST00000555358 STX17P56962 302 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 SOGA3Q5TF21 947 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 CCDC34Q96HJ3 373 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 IDI2Q9BXS1 227 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 PARD6BQ9BYG5 372 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 PPP1R3GB7ZBB8 358 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 VIL1P09327 827 aaKnown RBP26.73■■□□□ 1.87
STRN3-207ENST00000555358 XBP1P17861 261 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 SHMT1P34896 483 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 KLHL10Q6JEL2 608 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 MAD2L2Q9UI95 211 aa26.73■■□□□ 1.87
STRN3-207ENST00000555358 VEGFAP15692 232 aaPredicted RBP26.72■■□□□ 1.87
STRN3-207ENST00000555358 KIF5BP33176 963 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 GRM4Q14833 912 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 SH3BP5LQ7L8J4 393 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 CLEC10AQ8IUN9 316 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 GOLGA1Q92805 767 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 FERMT2Q96AC1 680 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 GSDMAQ96QA5 445 aa26.72■■□□□ 1.87
STRN3-207ENST00000555358 ERICH4A6NGS2 130 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 HLA-DOAP06340 250 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 TNFRSF25Q93038 417 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 GMLQ99445 158 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 DNAJC18Q9H819 358 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 A0A0U1RQJ8 604 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 FAM196BA6NMK8 535 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 MFAP3LO75121 409 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 PPFIBP1Q86W92 1011 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 NIM1KQ8IY84 436 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 SMYD4Q8IYR2 804 aaPredicted RBP26.71■■□□□ 1.87
STRN3-207ENST00000555358 ATRIPQ8WXE1 791 aa26.71■■□□□ 1.87
STRN3-207ENST00000555358 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.71■■□□□ 1.87
STRN3-207ENST00000555358 NPY5RQ15761 445 aa26.7■■□□□ 1.87
STRN3-207ENST00000555358 CTAGE1Q96RT6 745 aa26.7■■□□□ 1.87
STRN3-207ENST00000555358 LZTFL1Q9NQ48 299 aa26.7■■□□□ 1.87
STRN3-207ENST00000555358 SWAP70Q9UH65 585 aa26.7■■□□□ 1.87
STRN3-207ENST00000555358 ZNRF3Q9ULT6 936 aa26.7■■□□□ 1.87
STRN3-207ENST00000555358 SLC35G1Q2M3R5 365 aa26.7■■□□□ 1.86
STRN3-207ENST00000555358 PLIN4Q96Q06 1357 aa26.7■■□□□ 1.86
STRN3-207ENST00000555358 BMP15O95972 392 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 GOLGA8HP0CJ92 632 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 FECHP22830 423 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 PTGER2P43116 358 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 EIF6P56537 245 aaKnown RBP26.69■■□□□ 1.86
STRN3-207ENST00000555358 NOM1Q5C9Z4 860 aaKnown RBP26.69■■□□□ 1.86
STRN3-207ENST00000555358 ZSCAN29Q8IWY8 852 aaPredicted RBP26.69■■□□□ 1.86
STRN3-207ENST00000555358 VPS33BQ9H267 617 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 MYO3BQ8WXR4 1341 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 TXLNAP40222 546 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 NOVP48745 357 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 CPLX3Q8WVH0 158 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 TAOK3Q9H2K8 898 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 ARFGAP3Q9NP61 516 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 MTMR4Q9NYA4 1195 aa26.69■■□□□ 1.86
STRN3-207ENST00000555358 NFKBIEO00221 500 aa26.68■■□□□ 1.86
STRN3-207ENST00000555358 EHD4Q9H223 541 aa26.68■■□□□ 1.86
STRN3-207ENST00000555358 BCS1LQ9Y276 419 aa26.68■■□□□ 1.86
STRN3-207ENST00000555358 ITIH6Q6UXX5 1313 aa26.68■■□□□ 1.86
STRN3-207ENST00000555358 GYPCP04921 128 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 FUT8Q9BYC5 575 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 IGKV6D-41A0A0C4DH26 115 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 POLR3GO15318 223 aaPredicted RBP26.67■■□□□ 1.86
STRN3-207ENST00000555358 CASP14P31944 242 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 CXCL9Q07325 125 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 ZNF174Q15697 407 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 DHX36Q9H2U1 1008 aaKnown RBP26.67■■□□□ 1.86
STRN3-207ENST00000555358 CPVLQ9H3G5 476 aa26.67■■□□□ 1.86
STRN3-207ENST00000555358 PALM3A6NDB9 673 aaPredicted RBP26.66■■□□□ 1.86
STRN3-207ENST00000555358 SPDYE2BA6NHP3 402 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 CYTH3O43739 400 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 SPDYE6P0CI01 402 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 ATP2C1P98194 919 aaPredicted RBP26.66■■□□□ 1.86
STRN3-207ENST00000555358 E2F4Q16254 413 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 FILIP1LQ4L180 1135 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 SRGAP1Q7Z6B7 1085 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 SCG2P13521 617 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 OAS2P29728 719 aaKnown RBP26.66■■□□□ 1.86
STRN3-207ENST00000555358 FXR1P51114 621 aaKnown RBP eCLIP26.66■■□□□ 1.86
STRN3-207ENST00000555358 SHROOM1Q2M3G4 852 aaPredicted RBP26.66■■□□□ 1.86
STRN3-207ENST00000555358 TTC38Q5R3I4 469 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 USP17L2Q6R6M4 530 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 PI4KBQ9UBF8 816 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 CD2APQ9Y5K6 639 aa26.66■■□□□ 1.86
STRN3-207ENST00000555358 GREB1LQ9C091 1923 aaPredicted RBP26.66■■□□□ 1.86
STRN3-207ENST00000555358 CLRN2A0PK11 232 aa26.65■■□□□ 1.86
STRN3-207ENST00000555358 NPM3O75607 178 aaKnown RBP26.65■■□□□ 1.86
STRN3-207ENST00000555358 CHMP4BP1P59074 171 aa26.65■■□□□ 1.86
STRN3-207ENST00000555358 SMC1AQ14683 1233 aaKnown RBP26.65■■□□□ 1.86
STRN3-207ENST00000555358 PFKFB3Q16875 520 aaPredicted RBP26.65■■□□□ 1.86
STRN3-207ENST00000555358 JAKMIP3Q5VZ66 844 aa26.65■■□□□ 1.86
STRN3-207ENST00000555358 CNGA4Q8IV77 575 aa26.65■■□□□ 1.86
STRN3-207ENST00000555358 LRRC47Q8N1G4 583 aaKnown RBP26.65■■□□□ 1.86
STRN3-207ENST00000555358 CCDC51Q96ER9 411 aa26.65■■□□□ 1.86
STRN3-207ENST00000555358 CTNND2Q9UQB3 1225 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms