RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TNPO2O14787 897 aaKnown RBP16.49■□□□□ 0.23
CHD8-208ENST00000555301 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
CHD8-208ENST00000555301 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 GNRH1P01148 92 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 SCG2P13521 617 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHD8-208ENST00000555301 HEATR3Q7Z4Q2 680 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
CHD8-208ENST00000555301 CD99L2Q8TCZ2 262 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 WASF1Q92558 559 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 COA7Q96BR5 231 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 MAF1Q9H063 256 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 PCNTO95613 3336 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 FCER1AP12319 257 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 HOXD10P28358 340 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
CHD8-208ENST00000555301 KCTD2Q14681 263 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 PKN1Q16512 942 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 PPP1R18Q6NYC8 613 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 ABRAQ8N0Z2 381 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 BARHL2Q9NY43 387 aa16.48■□□□□ 0.23
CHD8-208ENST00000555301 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 PTPREP23469 700 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 LBX1P52954 281 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 CUL4AQ13619 759 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
CHD8-208ENST00000555301 ANKRD35Q8N283 1001 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 CCDC12Q8WUD4 166 aaPredicted RBP16.47■□□□□ 0.23
CHD8-208ENST00000555301 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 MMP19Q99542 508 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
CHD8-208ENST00000555301 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
CHD8-208ENST00000555301 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
CHD8-208ENST00000555301 PFASO15067 1338 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
CHD8-208ENST00000555301 TAL1P17542 331 aaPredicted RBP16.46■□□□□ 0.23
CHD8-208ENST00000555301 XBP1P17861 261 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 CTGFP29279 349 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 GRB14Q14449 540 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 MUM1L1Q5H9M0 696 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 TEX2Q8IWB9 1127 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.23
CHD8-208ENST00000555301 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
CHD8-208ENST00000555301 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
CHD8-208ENST00000555301 STXBP3O00186 592 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 NFIBO00712 420 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 JAK2O60674 1132 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 NAPAP54920 295 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 PRMT2P55345 433 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 RNF207Q6ZRF8 634 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 GLT8D2Q9H1C3 349 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
CHD8-208ENST00000555301 SLC5A4Q9NY91 659 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
CHD8-208ENST00000555301 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
CHD8-208ENST00000555301 ADORA2AP29274 412 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 GHRHRQ02643 423 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 BECN1Q14457 450 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 MORN1Q5T089 497 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
CHD8-208ENST00000555301 PSTPIP2Q9H939 334 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 CYP39A1Q9NYL5 469 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
CHD8-208ENST00000555301 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
CHD8-208ENST00000555301 OPLAHO14841 1288 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 CFBP00751 764 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 GNA11P29992 359 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 RGS2P41220 211 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
CHD8-208ENST00000555301 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 CUL5Q93034 780 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 ALG1Q9BT22 464 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 C6orf50Q9HD87 102 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 PRDM10Q9NQV6 1147 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
CHD8-208ENST00000555301 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms