RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-212ENST00000555254 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
PSEN1-212ENST00000555254 CHURC1Q8WUH1 139 aa20.24■□□□□ 0.83
PSEN1-212ENST00000555254 SCAND2PQ9GZW5 306 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-212ENST00000555254 FOXP1Q9H334 677 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-212ENST00000555254 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 CYTH3O43739 400 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
PSEN1-212ENST00000555254 PSMC4P43686 418 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 GCLCP48506 637 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-212ENST00000555254 HERVK_113P62684 666 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 CAP1Q01518 475 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 TTBK2Q6IQ55 1244 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 GALNT17Q6IS24 598 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
PSEN1-212ENST00000555254 ADGRF4Q8IZF3 695 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 PIGSQ96S52 555 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 PHF20Q9BVI0 1012 aa20.23■□□□□ 0.83
PSEN1-212ENST00000555254 TMEM232C9JQI7 657 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 PEX10O60683 326 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 SLC16A2P36021 539 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 TRAF1Q13077 416 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 RASGRP2Q7LDG7 609 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 FAM160B2Q86V87 743 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 LPAR1Q92633 364 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 CPVLQ9H3G5 476 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 BARHL2Q9NY43 387 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 CNPY2Q9Y2B0 182 aa20.22■□□□□ 0.83
PSEN1-212ENST00000555254 FIBPO43427 364 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 U2AF2P26368 475 aaKnown RBP eCLIP20.21■□□□□ 0.83
PSEN1-212ENST00000555254 NAPAP54920 295 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 SLC35G1Q2M3R5 365 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 FAM173BQ6P4H8 233 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
PSEN1-212ENST00000555254 JMJD4Q9H9V9 463 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 C6orf50Q9HD87 102 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 TFIP11Q9UBB9 837 aaKnown RBP20.21■□□□□ 0.83
PSEN1-212ENST00000555254 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
PSEN1-212ENST00000555254 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 ZBTB5O15062 677 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 GNA11P29992 359 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
PSEN1-212ENST00000555254 FAM83BQ5T0W9 1011 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 BTNL9Q6UXG8 535 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.82
PSEN1-212ENST00000555254 TRIM47Q96LD4 638 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 SPATA32Q96LK8 384 aa20.2■□□□□ 0.82
PSEN1-212ENST00000555254 GOLGA6L4A6NEF3 574 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 STXBP3O00186 592 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 PLA2G6O60733 806 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 CTGFP29279 349 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 STAT2P52630 851 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 FCGRTP55899 365 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 COG2Q14746 738 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 MYSM1Q5VVJ2 828 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 GPRC5AQ8NFJ5 357 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
PSEN1-212ENST00000555254 NOL7Q9UMY1 257 aaKnown RBP20.19■□□□□ 0.82
PSEN1-212ENST00000555254 MYH4Q9Y623 1939 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 KIF28PB7ZC32 967 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
PSEN1-212ENST00000555254 FLOT1O75955 427 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 FAM110CQ1W6H9 321 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 PPP1R18Q6NYC8 613 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 FBXO46Q6PJ61 603 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-212ENST00000555254 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
PSEN1-212ENST00000555254 BLIDQ8IZY5 108 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 TXNRD2Q9NNW7 524 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 LMBRD1Q9NUN5 540 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 PCDHA4Q9UN74 947 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
PSEN1-212ENST00000555254 PTPRFP10586 1907 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 SMCO2A6NFE2 343 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 TNPO2O14787 897 aaKnown RBP20.17■□□□□ 0.82
PSEN1-212ENST00000555254 TRAK2O60296 914 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 CDC37Q16543 378 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-212ENST00000555254 HABP4Q5JVS0 413 aaKnown RBP20.17■□□□□ 0.82
PSEN1-212ENST00000555254 GTF3C2Q8WUA4 911 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-212ENST00000555254 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 ANP32EQ9BTT0 268 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 GLT8D2Q9H1C3 349 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
PSEN1-212ENST00000555254 ESYT2A0FGR8 921 aa20.16■□□□□ 0.82
PSEN1-212ENST00000555254 SPDYE16A6NNV3 312 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-212ENST00000555254 HOXD10P28358 340 aa20.16■□□□□ 0.82
PSEN1-212ENST00000555254 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
PSEN1-212ENST00000555254 STK38Q15208 465 aa20.16■□□□□ 0.82
PSEN1-212ENST00000555254 SF3A1Q15459 793 aaKnown RBP20.16■□□□□ 0.82
PSEN1-212ENST00000555254 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms