RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 PLAAQ9Y263 795 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 IFNAR2P48551 515 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 KRT83P78385 493 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 PDE4DQ08499 809 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 RASGRF1Q13972 1273 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 IFIT1BQ5T764 474 aaKnown RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 TAX1BP1Q86VP1 789 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 NLRP14Q86W24 1093 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 KCNH5Q8NCM2 988 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 TTLL11Q8NHH1 800 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 GJA10Q969M2 543 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 STIM2Q9P246 746 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 MYH10P35580 1976 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 GSG1L2A8MUP6 293 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 CLTAP09496 248 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 VAV2P52735 878 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 INF2Q27J81 1249 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 FAM133BQ5BKY9 247 aaKnown RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 NT5DC1Q5TFE4 455 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 CACNA2D4Q7Z3S7 1137 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 IQCA1Q86XH1 822 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 MTMR8Q96EF0 704 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 FOXP1Q9H334 677 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 MLXIPLQ9NP71 852 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 LIMA1Q9UHB6 759 aaKnown RBP9.87□□□□□ -0.83
SYNE2-217ENST00000555022 KCNG1Q9UIX4 513 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 SNX12Q9UMY4 172 aa9.87□□□□□ -0.83
SYNE2-217ENST00000555022 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 GOLGA8HP0CJ92 632 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 CYP2D6P10635 497 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 ELF1P32519 619 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 UBA7P41226 1012 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 ADCY1Q08828 1119 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 SELENOSQ9BQE4 189 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 TMEM60Q9H2L4 133 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 AATFQ9NY61 560 aaKnown RBP eCLIP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 PCDHA13Q9Y5I0 950 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 KDM6AO15550 1401 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 MYH15Q9Y2K3 1946 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 LGALS16A8MUM7 142 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 XBP1P17861 261 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 KIF11P52732 1056 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 DNAJC10Q8IXB1 793 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC24Q8N4L8 307 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 MYCBPAPQ8TBZ2 947 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC51Q96ER9 411 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 PACSIN1Q9BY11 444 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 EXOC1Q9NV70 894 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 RWDD2AQ9UIY3 292 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 L3MBTL1Q9Y468 752 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 GOLGB1Q14789 3259 aaKnown RBP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 FAM237AA0A1B0GTK4 181 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 LRRC53A6NM62 1247 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 STK4Q13043 487 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
SYNE2-217ENST00000555022 ANKRD40Q6AI12 368 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 ADGRA1Q86SQ6 560 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 MGARPQ8TDB4 240 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 CASKIN2Q8WXE0 1202 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 LRRC37A3O60309 1634 aa9.86□□□□□ -0.83
SYNE2-217ENST00000555022 GOLGA8KD6RF30 607 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 PSMA7O14818 248 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 LGR5O75473 907 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 CPP00450 1065 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 MCM3P25205 808 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 MYO1EQ12965 1108 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 PPP1R7Q15435 360 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 ANKLE2Q86XL3 938 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 TEX11Q8IYF3 940 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 CNPY4Q8N129 248 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 FAM167BQ9BTA0 163 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 VIPAS39Q9H9C1 493 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 ARHGAP20Q9P2F6 1191 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 NOVA2Q9UNW9 492 aaKnown RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 GOLGA6L10A6NI86 522 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 RASSF10A6NK89 507 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 ENO4A6NNW6 628 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 USO1O60763 962 aaKnown RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 SPAG1Q07617 926 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 MAP3K12Q12852 859 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 PKN1Q16512 942 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 PTGISQ16647 500 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 PAPD7Q5XG87 772 aaKnown RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 SPTY2D1Q68D10 685 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 HIBCHQ6NVY1 386 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-217ENST00000555022 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
SYNE2-217ENST00000555022 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms