RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SAMD1Q6SPF0 538 aaPredicted RBP19.89■□□□□ 0.77
SHOX-204ENST00000554971 C17orf99Q6UX52 265 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 BTNL9Q6UXG8 535 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.89■□□□□ 0.77
SHOX-204ENST00000554971 NBPF11Q86T75 865 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 CCDC144CPQ8IYA2 1237 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 NUP133Q8WUM0 1156 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 SLF1Q9BQI6 1058 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 ZFYVE28Q9HCC9 887 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 RBPJLQ9UBG7 517 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 FEM1BQ9UK73 627 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 A0A1W2PQ27 194 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 A0A1W2PQ64 194 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 A0A1W2PQD8 194 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 CNMDO75829 334 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 PARP1P09874 1014 aaKnown RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 BCRP11274 1271 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 CAMK4Q16566 473 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 GPATCH4Q5T3I0 446 aaKnown RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 CCDC73Q6ZRK6 1079 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 KIFC2Q96AC6 838 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 BTBD7Q9P203 1132 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 CPA4Q9UI42 421 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 MGAMO43451 1857 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 MYPNQ86TC9 1320 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 VWA5AO00534 786 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 CDKL5O76039 1030 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 FDPSP14324 419 aaKnown RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 ASPRV1Q53RT3 343 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 PRPF38AQ8NAV1 312 aaKnown RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 REPS2Q8NFH8 660 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 MAP3K14Q99558 947 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 UBA5Q9GZZ9 404 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 NCOA5Q9HCD5 579 aaKnown RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 FAM217BQ9NTX9 383 aaPredicted RBP19.88■□□□□ 0.77
SHOX-204ENST00000554971 HOXC10Q9NYD6 342 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 PRR12Q9ULL5 1215 aa19.88■□□□□ 0.77
SHOX-204ENST00000554971 CAP1Q01518 475 aa19.87■□□□□ 0.77
SHOX-204ENST00000554971 FAM160A1Q05DH4 1040 aa19.87■□□□□ 0.77
SHOX-204ENST00000554971 ANKRD13CQ8N6S4 541 aa19.87■□□□□ 0.77
SHOX-204ENST00000554971 FBXO18Q8NFZ0 1043 aa19.87■□□□□ 0.77
SHOX-204ENST00000554971 C8orf76Q96K31 380 aa19.87■□□□□ 0.77
SHOX-204ENST00000554971 NAP1L2Q9ULW6 460 aaPredicted RBP19.87■□□□□ 0.77
SHOX-204ENST00000554971 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CPLX1O14810 134 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 FOXN1O15353 648 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 ZBTB43O43298 467 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CYTH3O43739 400 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 YEATS4O95619 227 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CDC27P30260 824 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 Q3C1V9 767 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 ANO6Q4KMQ2 910 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 ADALQ6DHV7 355 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CCAR1Q8IX12 1150 aaKnown RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 FANCBQ8NB91 859 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 KCNG4Q8TDN1 519 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 USP28Q96RU2 1077 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 BEGAINQ9BUH8 593 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 NID2Q14112 1375 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 GOLGA8BA8MQT2 603 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 KLRF2D3W0D1 207 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 PLEKHA8P1O95397 391 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 HSPA1AP0DMV8 641 aaKnown RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 HSPA1BP0DMV9 641 aaKnown RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 SNAP25P60880 206 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 TMEM132BQ14DG7 1078 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CPLX2Q6PUV4 134 aaKnown RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 CKAP2LQ8IYA6 745 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CMTR1Q8N1G2 835 aaKnown RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 CHURC1Q8WUH1 139 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 SLC38A10Q9HBR0 1119 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 CBX8Q9HC52 389 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 SPTLC3Q9NUV7 552 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 POLR3EQ9NVU0 708 aa19.86■□□□□ 0.77
SHOX-204ENST00000554971 ZNF214Q9UL59 606 aaPredicted RBP19.86■□□□□ 0.77
SHOX-204ENST00000554971 GCLCP48506 637 aaPredicted RBP19.85■□□□□ 0.77
SHOX-204ENST00000554971 ZNF165P49910 485 aa19.85■□□□□ 0.77
SHOX-204ENST00000554971 IKQ13123 557 aaPredicted RBP19.85■□□□□ 0.77
SHOX-204ENST00000554971 SYDE2Q5VT97 1194 aa19.85■□□□□ 0.77
SHOX-204ENST00000554971 FAM160B2Q86V87 743 aa19.85■□□□□ 0.77
SHOX-204ENST00000554971 ENGASEQ8NFI3 743 aa19.85■□□□□ 0.77
SHOX-204ENST00000554971 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
SHOX-204ENST00000554971 ORC3Q9UBD5 711 aaPredicted RBP19.85■□□□□ 0.77
SHOX-204ENST00000554971 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
SHOX-204ENST00000554971 RCAN1P53805 252 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 FAM110CQ1W6H9 321 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 ADGRF4Q8IZF3 695 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 MORF4L1Q9UBU8 362 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 RABGAP1Q9Y3P9 1069 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 ZNF536O15090 1300 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 GPR25O00155 361 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 CALM1P0DP23 149 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 CALM2P0DP24 149 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 CALM3P0DP25 149 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 ERVK-24P63145 666 aa19.84■□□□□ 0.77
SHOX-204ENST00000554971 NOLC1Q14978 699 aaKnown RBP eCLIP19.84■□□□□ 0.77
SHOX-204ENST00000554971 SRBD1Q8N5C6 995 aaKnown RBP19.84■□□□□ 0.77
SHOX-204ENST00000554971 CTCFLQ8NI51 663 aaPredicted RBP19.84■□□□□ 0.77
SHOX-204ENST00000554971 JMJD4Q9H9V9 463 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms