RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
ATXN3-229ENST00000554672 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
ATXN3-229ENST00000554672 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.42
ATXN3-229ENST00000554672 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 WISP1O95388 367 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 GTF2A2P52657 109 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 KIF22Q14807 665 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 TTC39BQ5VTQ0 682 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 TXNDC11Q6PKC3 985 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 MAP4K3Q8IVH8 894 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 AGGF1Q8N302 714 aaeCLIP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 MYD88Q99836 296 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 LACRTQ9GZZ8 138 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 SRA1Q9HD15 236 aaKnown RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
ATXN3-229ENST00000554672 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
ATXN3-229ENST00000554672 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 LRP8Q14114 963 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 RASA3Q14644 834 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 PDE12Q6L8Q7 609 aaKnown RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 TTLL11Q8NHH1 800 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 UBL7Q96S82 380 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 POP1Q99575 1024 aaKnown RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 METTL22Q9BUU2 404 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 PBX4Q9BYU1 374 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
ATXN3-229ENST00000554672 SH2B1Q9NRF2 756 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-229ENST00000554672 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CLRN2A0PK11 232 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CDC27P30260 824 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CDC25BP30305 580 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 KCNJ4P48050 445 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CTSWP56202 376 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CFAP100Q494V2 611 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 SPACA7Q96KW9 195 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 MUC3BQ9H195 1237 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 GREM2Q9H772 168 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 VEZTQ9HBM0 779 aa6.18□□□□□ -1.42
ATXN3-229ENST00000554672 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
ATXN3-229ENST00000554672 LAMB4A4D0S4 1761 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 ANKRD36CQ5JPF3 1778 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 A6NHS1 94 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-229ENST00000554672 SMNDC1O75940 238 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-229ENST00000554672 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 ACPPP15309 386 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 EPHA1P21709 976 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 CD68P34810 354 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-229ENST00000554672 GJA8P48165 433 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-229ENST00000554672 XKR5Q6UX68 686 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 C1orf127Q8N9H9 656 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 HELQQ8TDG4 1101 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 EDEM1Q92611 657 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 KANSL3Q9P2N6 904 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 SALL4Q9UJQ4 1053 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 CSADQ9Y600 493 aa6.17□□□□□ -1.42
ATXN3-229ENST00000554672 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-229ENST00000554672 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 FSCN2O14926 492 aa6.16□□□□□ -1.42
ATXN3-229ENST00000554672 DDX3YO15523 660 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms