RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.72■■■□□ 2.19
FOXA1-204ENST00000554607 MCCP23508 829 aa28.72■■■□□ 2.19
FOXA1-204ENST00000554607 TLK2Q86UE8 772 aa28.72■■■□□ 2.19
FOXA1-204ENST00000554607 SEC62Q99442 399 aaKnown RBP28.72■■■□□ 2.19
FOXA1-204ENST00000554607 SPTBN5Q9NRC6 3674 aaKnown RBP28.72■■■□□ 2.19
FOXA1-204ENST00000554607 GRXCR1A8MXD5 290 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 ALAS1P13196 640 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 CYP2C18P33260 490 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 PBX2P40425 430 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 RAB30Q15771 203 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 FSCN1Q16658 493 aaKnown RBP28.71■■■□□ 2.19
FOXA1-204ENST00000554607 IQSEC1Q6DN90 963 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 RCSD1Q6JBY9 416 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 CXCL17Q6UXB2 119 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 USP38Q8NB14 1042 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 HERVK_113Q902F9 699 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 FSD1Q9BTV5 496 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 MSRAQ9UJ68 235 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 STX8Q9UNK0 236 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 Q9Y3F1 56 aa28.71■■■□□ 2.19
FOXA1-204ENST00000554607 FGBP02675 491 aa28.7■■■□□ 2.18
FOXA1-204ENST00000554607 ITGA7Q13683 1181 aa28.7■■■□□ 2.18
FOXA1-204ENST00000554607 HIPK3Q9H422 1215 aa28.7■■■□□ 2.18
FOXA1-204ENST00000554607 ASTN1O14525 1302 aa28.69■■■□□ 2.18
FOXA1-204ENST00000554607 TSPY2A6NKD2 308 aa28.69■■■□□ 2.18
FOXA1-204ENST00000554607 DYNC1LI2O43237 492 aaPredicted RBP28.69■■■□□ 2.18
FOXA1-204ENST00000554607 ZMYM1Q5SVZ6 1142 aa28.69■■■□□ 2.18
FOXA1-204ENST00000554607 AKNAD1Q5T1N1 836 aa28.69■■■□□ 2.18
FOXA1-204ENST00000554607 TTC28Q96AY4 2481 aa28.68■■■□□ 2.18
FOXA1-204ENST00000554607 KCTD1Q719H9 257 aa28.68■■■□□ 2.18
FOXA1-204ENST00000554607 CYP39A1Q9NYL5 469 aa28.68■■■□□ 2.18
FOXA1-204ENST00000554607 PRR12Q9ULL5 1215 aa28.68■■■□□ 2.18
FOXA1-204ENST00000554607 SMPD1P17405 629 aa28.67■■■□□ 2.18
FOXA1-204ENST00000554607 PI4K2BQ8TCG2 481 aa28.67■■■□□ 2.18
FOXA1-204ENST00000554607 CHMP4CQ96CF2 233 aa28.67■■■□□ 2.18
FOXA1-204ENST00000554607 PRDM12Q9H4Q4 367 aa28.67■■■□□ 2.18
FOXA1-204ENST00000554607 VTA1Q9NP79 307 aa28.66■■■□□ 2.18
FOXA1-204ENST00000554607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.66■■■□□ 2.18
FOXA1-204ENST00000554607 MUM1L1Q5H9M0 696 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 TAPT1Q6NXT6 567 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 RPUSD2Q8IZ73 545 aaKnown RBP28.65■■■□□ 2.18
FOXA1-204ENST00000554607 ATXN2LQ8WWM7 1075 aaKnown RBP28.65■■■□□ 2.18
FOXA1-204ENST00000554607 PPM1EQ8WY54 764 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 PDGFCQ9NRA1 345 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 IL17RBQ9NRM6 502 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 CCPG1Q9ULG6 757 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 MYO9BQ13459 2157 aa28.65■■■□□ 2.18
FOXA1-204ENST00000554607 NSMFQ6X4W1 530 aa28.64■■■□□ 2.18
FOXA1-204ENST00000554607 EEPD1Q7L9B9 569 aa28.64■■■□□ 2.18
FOXA1-204ENST00000554607 SLC28A3Q9HAS3 691 aa28.64■■■□□ 2.18
FOXA1-204ENST00000554607 CXXC1Q9P0U4 656 aaPredicted RBP28.64■■■□□ 2.18
FOXA1-204ENST00000554607 GRIN2DO15399 1336 aa28.64■■■□□ 2.17
FOXA1-204ENST00000554607 TNFRSF10AO00220 468 aa28.63■■■□□ 2.17
FOXA1-204ENST00000554607 SNAP25P60880 206 aa28.63■■■□□ 2.17
FOXA1-204ENST00000554607 KIAA1211Q6ZU35 1233 aa28.63■■■□□ 2.17
FOXA1-204ENST00000554607 FBXO16Q8IX29 292 aaPredicted RBP28.63■■■□□ 2.17
FOXA1-204ENST00000554607 MORC4Q8TE76 937 aa28.63■■■□□ 2.17
FOXA1-204ENST00000554607 DCAF4Q8WV16 495 aa28.63■■■□□ 2.17
FOXA1-204ENST00000554607 NOC4LQ9BVI4 516 aaKnown RBP28.63■■■□□ 2.17
FOXA1-204ENST00000554607 ADD3Q9UEY8 706 aaKnown RBP28.63■■■□□ 2.17
FOXA1-204ENST00000554607 B4GALT4O60513 344 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 RANBP6O60518 1105 aaKnown RBP28.62■■■□□ 2.17
FOXA1-204ENST00000554607 ICAM1P05362 532 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 CCL23P55773 120 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 CTDSPL2Q05D32 466 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 OTOP2Q7RTS6 562 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 TRPV6Q9H1D0 765 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 UMODL1Q5DID0 1318 aa28.62■■■□□ 2.17
FOXA1-204ENST00000554607 LOC102724159A0A0B4J2E5 919 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 NMT2O60551 498 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 NOVP48745 357 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 PWP2Q15269 919 aaKnown RBP28.61■■■□□ 2.17
FOXA1-204ENST00000554607 CCDC96Q2M329 555 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 NKX2-4Q9H2Z4 354 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 THEGQ9P2T0 379 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 ANAPC4Q9UJX5 808 aa28.61■■■□□ 2.17
FOXA1-204ENST00000554607 MX1P20591 662 aa28.6■■■□□ 2.17
FOXA1-204ENST00000554607 DUSP28Q4G0W2 176 aa28.6■■■□□ 2.17
FOXA1-204ENST00000554607 RANBP17Q9H2T7 1088 aaKnown RBP28.6■■■□□ 2.17
FOXA1-204ENST00000554607 INCENPQ9NQS7 918 aa28.6■■■□□ 2.17
FOXA1-204ENST00000554607 POLR3EQ9NVU0 708 aa28.6■■■□□ 2.17
FOXA1-204ENST00000554607 MTMR7Q9Y216 660 aa28.6■■■□□ 2.17
FOXA1-204ENST00000554607 DDX49Q9Y6V7 483 aaKnown RBP28.6■■■□□ 2.17
FOXA1-204ENST00000554607 ORC4O43929 436 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 SUPT20HL2P0C7V6 817 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 IGFBP4P22692 258 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 PSMC6P62333 389 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 OTUD7AQ8TE49 926 aaPredicted RBP28.59■■■□□ 2.17
FOXA1-204ENST00000554607 SLC4A7Q9Y6M7 1214 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 LRRC37A2A6NM11 1700 aa28.59■■■□□ 2.17
FOXA1-204ENST00000554607 FOXP2O15409 715 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 PTGS1P23219 599 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 BAATQ14032 418 aaPredicted RBP28.58■■■□□ 2.17
FOXA1-204ENST00000554607 ADGRE1Q14246 886 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 BTNL9Q6UXG8 535 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 ASB2Q96Q27 587 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 WNT8AQ9H1J5 351 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 ALDH8A1Q9H2A2 487 aaPredicted RBP28.58■■■□□ 2.17
FOXA1-204ENST00000554607 PNMA2Q9UL42 364 aa28.58■■■□□ 2.17
FOXA1-204ENST00000554607 CHD9Q3L8U1 2897 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms