RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CHD1LQ86WJ1 897 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 TTC14Q96N46 770 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 KATNBL1Q9H079 304 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 CYP39A1Q9NYL5 469 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 SDSP20132 328 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 ITGB8P26012 769 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 SLC16A2P36021 539 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 HAND2P61296 217 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 FPGSQ05932 587 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 AKNAD1Q5T1N1 836 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 ZNF697Q5TEC3 545 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 SYDE2Q5VT97 1194 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 NSMFQ6X4W1 530 aa22.1■■□□□ 1.13
CPSF2-203ENST00000554290 RANBP17Q9H2T7 1088 aaKnown RBP22.1■■□□□ 1.13
CPSF2-203ENST00000554290 RNF41Q9H4P4 317 aaPredicted RBP22.1■■□□□ 1.13
CPSF2-203ENST00000554290 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
CPSF2-203ENST00000554290 NKX3-2P78367 333 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 IRX5P78411 483 aaPredicted RBP22.09■■□□□ 1.13
CPSF2-203ENST00000554290 TTBK2Q6IQ55 1244 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 PLEKHM2Q8IWE5 1019 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 AP5M1Q9H0R1 490 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 GPCPD1Q9NPB8 672 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 PNMA2Q9UL42 364 aa22.09■■□□□ 1.13
CPSF2-203ENST00000554290 CDK7P50613 346 aa22.08■■□□□ 1.13
CPSF2-203ENST00000554290 SMAD3P84022 425 aaKnown RBP22.08■■□□□ 1.13
CPSF2-203ENST00000554290 NUCB1Q02818 461 aa22.08■■□□□ 1.13
CPSF2-203ENST00000554290 FRMPD2Q68DX3 1309 aaPredicted RBP22.07■■□□□ 1.12
CPSF2-203ENST00000554290 ARVCFO00192 962 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 ZNF213O14771 459 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 TLR3O15455 904 aaKnown RBP22.07■■□□□ 1.12
CPSF2-203ENST00000554290 TIMP1P01033 207 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 IGHDP01880 384 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 IQSEC1Q6DN90 963 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 ESR2Q92731 530 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 RNPC3Q96LT9 517 aaKnown RBP22.07■■□□□ 1.12
CPSF2-203ENST00000554290 FAM161BQ96MY7 647 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 DIAPH3Q9NSV4 1193 aa22.07■■□□□ 1.12
CPSF2-203ENST00000554290 ADD3Q9UEY8 706 aaKnown RBP22.07■■□□□ 1.12
CPSF2-203ENST00000554290 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.06■■□□□ 1.12
CPSF2-203ENST00000554290 HIP1O00291 1037 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 CABYRO75952 493 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 PDHBP11177 359 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 NT5C2P49902 561 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 BEX3Q00994 111 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 BAATQ14032 418 aaPredicted RBP22.06■■□□□ 1.12
CPSF2-203ENST00000554290 TLK2Q86UE8 772 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 VTA1Q9NP79 307 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
CPSF2-203ENST00000554290 ASTN1O14525 1302 aa22.06■■□□□ 1.12
CPSF2-203ENST00000554290 CTAGE5O15320 804 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 ZEB2O60315 1214 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 EPHB4P54760 987 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 ZNF543Q08ER8 600 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 CWC27Q6UX04 472 aaKnown RBP22.05■■□□□ 1.12
CPSF2-203ENST00000554290 EEPD1Q7L9B9 569 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 GUCD1Q96NT3 240 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 Q9Y3F1 56 aa22.05■■□□□ 1.12
CPSF2-203ENST00000554290 LOC102724159A0A0B4J2E5 919 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 DYNC1LI2O43237 492 aaPredicted RBP22.04■■□□□ 1.12
CPSF2-203ENST00000554290 SMPD1P17405 629 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 PWP2Q15269 919 aaKnown RBP22.04■■□□□ 1.12
CPSF2-203ENST00000554290 FSCN1Q16658 493 aaKnown RBP22.04■■□□□ 1.12
CPSF2-203ENST00000554290 CCDC178Q5BJE1 867 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 MFSD5Q6N075 450 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 TAPT1Q6NXT6 567 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 DGKHQ86XP1 1220 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 TBC1D10CQ8IV04 446 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 FBXO16Q8IX29 292 aaPredicted RBP22.04■■□□□ 1.12
CPSF2-203ENST00000554290 EXOC6Q8TAG9 804 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 MORC4Q8TE76 937 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 PDGFCQ9NRA1 345 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 MCM3APO60318 1980 aa22.04■■□□□ 1.12
CPSF2-203ENST00000554290 PTPDC1A2A3K4 754 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 DLL1O00548 723 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 NFIBO00712 420 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 SNHG28P0DPA3 235 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 GPATCH4Q5T3I0 446 aaKnown RBP22.03■■□□□ 1.12
CPSF2-203ENST00000554290 CXCL17Q6UXB2 119 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 KIAA1211Q6ZU35 1233 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 IQCA1Q86XH1 822 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 FAM126BQ8IXS8 530 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 PURBQ96QR8 312 aaKnown RBP22.03■■□□□ 1.12
CPSF2-203ENST00000554290 SEZ6LQ9BYH1 1024 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 SEMA6BQ9H3T3 888 aa22.03■■□□□ 1.12
CPSF2-203ENST00000554290 DDX49Q9Y6V7 483 aaKnown RBP22.03■■□□□ 1.12
CPSF2-203ENST00000554290 ALDH5A1P51649 535 aaPredicted RBP22.02■■□□□ 1.12
CPSF2-203ENST00000554290 PPIGQ13427 754 aaKnown RBP eCLIP22.02■■□□□ 1.12
CPSF2-203ENST00000554290 TMEM199Q8N511 208 aa22.02■■□□□ 1.12
CPSF2-203ENST00000554290 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
CPSF2-203ENST00000554290 NEDD4P46934 1319 aa22.02■■□□□ 1.12
CPSF2-203ENST00000554290 CALML3P27482 149 aa22.01■■□□□ 1.11
CPSF2-203ENST00000554290 RNF207Q6ZRF8 634 aa22.01■■□□□ 1.11
CPSF2-203ENST00000554290 SLC43A3Q8NBI5 491 aa22.01■■□□□ 1.11
CPSF2-203ENST00000554290 ZKSCAN3Q9BRR0 538 aa22.01■■□□□ 1.11
CPSF2-203ENST00000554290 WDR19Q8NEZ3 1342 aa22.01■■□□□ 1.11
CPSF2-203ENST00000554290 TMEM265A0A087WTH1 108 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 HSFX4A0A1B0GTS1 333 aaPredicted RBP22■■□□□ 1.11
CPSF2-203ENST00000554290 HSFX3A0A1B0GWH4 333 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms