RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
AF111169.3-201ENST00000553991 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
AF111169.3-201ENST00000553991 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
AF111169.3-201ENST00000553991 STRBPQ96SI9 672 aaKnown RBP15.18■□□□□ 0.02
AF111169.3-201ENST00000553991 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
AF111169.3-201ENST00000553991 EPOPA6NHQ4 379 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 GPAA1O43292 621 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 PRKAB2O43741 272 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 B4GALT4O60513 344 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 CHGBP05060 677 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 C12orf60Q5U649 245 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 KRT40Q6A162 431 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 CXCL17Q6UXB2 119 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 OSBP2Q969R2 916 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 VWCEQ96DN2 955 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 SNX27Q96L92 541 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 SLF1Q9BQI6 1058 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 TRPV6Q9H1D0 765 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 RIPK3Q9Y572 518 aa15.17■□□□□ 0.02
AF111169.3-201ENST00000553991 MYH8P13535 1937 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 ATP2A1O14983 1001 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 RAD21O60216 631 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 ZEB2O60315 1214 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 IGHDP01880 384 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 BEX3Q00994 111 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 FSCN1Q16658 493 aaKnown RBP15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 NOL8Q76FK4 1167 aaKnown RBP15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 ARNTL2Q8WYA1 636 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 FGD4Q96M96 766 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 SLC9A7Q96T83 725 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 CERS4Q9HA82 394 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 LRRC37A2A6NM11 1700 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 GRIN2DO15399 1336 aa15.16■□□□□ 0.02
AF111169.3-201ENST00000553991 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 GBF1Q92538 1859 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 USP17L21D6R901 530 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 CDK8P49336 464 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 TNFAIP2Q03169 654 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 TAP1Q03518 808 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 ANKRD35Q8N283 1001 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 PHOSPHO2Q8TCD6 241 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 SCLYQ96I15 445 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 NACAP1Q9BZK3 213 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 KATNBL1Q9H079 304 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 OSBPL3Q9H4L5 887 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 ASTN1O14525 1302 aa15.15■□□□□ 0.02
AF111169.3-201ENST00000553991 BRWD1Q9NSI6 2320 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 GSG1L2A8MUP6 293 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 M0R2C6 588 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 ACTN1P12814 892 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 CTR9Q6PD62 1173 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 TLK2Q86UE8 772 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 PRPF38AQ8NAV1 312 aaKnown RBP15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 GNEQ9Y223 722 aaKnown RBP15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 COL11A1P12107 1806 aaPredicted RBP15.14■□□□□ 0.01
AF111169.3-201ENST00000553991 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 ZBED4O75132 1171 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 TDO2P48775 406 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 GRB10Q13322 594 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 CHST13Q8NET6 341 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 AP5M1Q9H0R1 490 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 KCNH6Q9H252 994 aa15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 ALDH8A1Q9H2A2 487 aaPredicted RBP15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
AF111169.3-201ENST00000553991 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 PATL2C9JE40 543 aaKnown RBP15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 ALADP13716 330 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 NHLH1Q02575 133 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 GJD3Q8N144 294 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 EPB41L4AQ9HCS5 686 aaPredicted RBP15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 HELLSQ9NRZ9 838 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 LMCD1Q9NZU5 365 aa15.12■□□□□ 0.01
AF111169.3-201ENST00000553991 LPXNO60711 386 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 ARHGEF15O94989 841 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 APPP05067 770 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 RFC2P35250 354 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 DEFB128Q7Z7B8 93 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 HERC6Q8IVU3 1022 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 PLEKHM2Q8IWE5 1019 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 SLC38A10Q9HBR0 1119 aa15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
AF111169.3-201ENST00000553991 Q9Y3F1 56 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms