RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 SREBF2Q12772 1141 aa16.21■□□□□ 0.19
PRKCH-206ENST00000553830 NR5A1Q13285 461 aa16.21■□□□□ 0.19
PRKCH-206ENST00000553830 PPP1R18Q6NYC8 613 aa16.21■□□□□ 0.19
PRKCH-206ENST00000553830 BLIDQ8IZY5 108 aa16.21■□□□□ 0.19
PRKCH-206ENST00000553830 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
PRKCH-206ENST00000553830 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.19
PRKCH-206ENST00000553830 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
PRKCH-206ENST00000553830 ABCB11O95342 1321 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 MYH7BA7E2Y1 1941 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-206ENST00000553830 FDX1P10109 184 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 RESTQ13127 1097 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-206ENST00000553830 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 POTEEQ6S8J3 1075 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 IFNL1Q8IU54 200 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 CUL5Q93034 780 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 PGBD1Q96JS3 809 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 TXNRD2Q9NNW7 524 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 TMEM260Q9NX78 707 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-206ENST00000553830 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 ADAMTS5Q9UNA0 930 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 SLC45A1Q9Y2W3 748 aa16.2■□□□□ 0.18
PRKCH-206ENST00000553830 TESPA1A2RU30 521 aaPredicted RBP16.19■□□□□ 0.18
PRKCH-206ENST00000553830 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 CNMDO75829 334 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 CFBP00751 764 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 GNA11P29992 359 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
PRKCH-206ENST00000553830 STAT3P40763 770 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 TRAF1Q13077 416 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 NOGQ13253 232 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
PRKCH-206ENST00000553830 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 WDR78Q5VTH9 848 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 LBX2Q6XYB7 198 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 ANKRD13CQ8N6S4 541 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 MB21D1Q8N884 522 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 ZNF214Q9UL59 606 aaPredicted RBP16.19■□□□□ 0.18
PRKCH-206ENST00000553830 RIPK3Q9Y572 518 aa16.19■□□□□ 0.18
PRKCH-206ENST00000553830 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
PRKCH-206ENST00000553830 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 ESYT2A0FGR8 921 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 NFIBO00712 420 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 NPY5RQ15761 445 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 USP17L6PQ6QN14 398 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 NCAPG2Q86XI2 1143 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 REXO1Q8N1G1 1221 aaKnown RBP16.18■□□□□ 0.18
PRKCH-206ENST00000553830 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
PRKCH-206ENST00000553830 SPATC1LQ9H0A9 340 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 CPA4Q9UI42 421 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 PCDHA6Q9UN73 950 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 PCDHA8Q9Y5H6 950 aa16.18■□□□□ 0.18
PRKCH-206ENST00000553830 PDIA4P13667 645 aaKnown RBP16.17■□□□□ 0.18
PRKCH-206ENST00000553830 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
PRKCH-206ENST00000553830 VEGFBP49765 207 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
PRKCH-206ENST00000553830 OAZ1P54368 228 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 PIK3AP1Q6ZUJ8 805 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 FCHSD1Q86WN1 690 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
PRKCH-206ENST00000553830 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 OPLAHO14841 1288 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 INHBEP58166 350 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 ERVK-9P63128 1117 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 ERVK-24P63145 666 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 Q3C1V9 767 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 RIOX2Q8IUF8 465 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 GTF3C2Q8WUA4 911 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 MOV10L1Q9BXT6 1211 aaKnown RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-206ENST00000553830 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 PNMA2Q9UL42 364 aa16.16■□□□□ 0.18
PRKCH-206ENST00000553830 LCTP09848 1927 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 ATP2A1O14983 1001 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 ERCC3P19447 782 aa16.15■□□□□ 0.18
PRKCH-206ENST00000553830 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-206ENST00000553830 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms