RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 NUDT19A8MXV4 375 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 C9IYK1 514 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 BUB1BO60566 1050 aaPredicted RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 TP53P04637 393 aaPredicted RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 LIMS1P48059 325 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 GJA8P48165 433 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 KCNC1P48547 511 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 SLURP1P55000 103 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 ZYXQ15942 572 aaKnown RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 TDRD10Q5VZ19 366 aaKnown RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 CWF19L1Q69YN2 538 aaKnown RBP5.29□□□□□ -1.56
LINC00648-201ENST00000553747 CPLX3Q8WVH0 158 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 FAM86C1Q9NVL1 165 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 INPP5FQ9Y2H2 1132 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 SLC12A7Q9Y666 1083 aa5.29□□□□□ -1.56
LINC00648-201ENST00000553747 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 K7ESM1 405 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 BMP8BP34820 402 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 KIR2DL1P43626 348 aaPredicted RBP5.28□□□□□ -1.56
LINC00648-201ENST00000553747 KIR2DL2P43627 348 aaPredicted RBP5.28□□□□□ -1.56
LINC00648-201ENST00000553747 RANGAP1P46060 587 aaPredicted RBP5.28□□□□□ -1.56
LINC00648-201ENST00000553747 NASPP49321 788 aaPredicted RBP5.28□□□□□ -1.56
LINC00648-201ENST00000553747 RTP1P59025 263 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 ERVFRD-1P60508 538 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 ZXDAP98168 799 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 RAB3GAP1Q15042 981 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 UBXN11Q5T124 520 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 OR6P1Q8NGX9 317 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 CDADC1Q9BWV3 514 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 SRRTQ9BXP5 876 aaKnown RBP5.28□□□□□ -1.56
LINC00648-201ENST00000553747 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
LINC00648-201ENST00000553747 MPOP05164 745 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 GSNP06396 782 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 VAV1P15498 845 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 CTSKP43235 329 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 GIPRP48546 466 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 TCEAL1Q15170 157 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 AXDND1Q5T1B0 1012 aaPredicted RBP5.27□□□□□ -1.57
LINC00648-201ENST00000553747 DCAF15Q66K64 600 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 OLFML2BQ68BL8 750 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 CRTC3Q6UUV7 619 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 PPFIBP1Q86W92 1011 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 SEC16BQ96JE7 1060 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 FCRL2Q96LA5 508 aaPredicted RBP5.27□□□□□ -1.57
LINC00648-201ENST00000553747 ACBD3Q9H3P7 528 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 TNFRSF10DQ9UBN6 386 aa5.27□□□□□ -1.57
LINC00648-201ENST00000553747 ZNF214Q9UL59 606 aaPredicted RBP5.27□□□□□ -1.57
LINC00648-201ENST00000553747 ABLIM1O14639 778 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 SHOXO15266 292 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 ZNF205O95201 554 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 ITGA4P13612 1032 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 CD247P20963 164 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 ZNF445P59923 1031 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 PPP2R5EQ16537 467 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 ZNF827Q17R98 1081 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 GNPTABQ3T906 1256 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 HSF5Q4G112 596 aaPredicted RBP5.26□□□□□ -1.57
LINC00648-201ENST00000553747 VPS37DQ86XT2 251 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 C19orf47Q8N9M1 422 aaKnown RBP5.26□□□□□ -1.57
LINC00648-201ENST00000553747 BRF1Q92994 677 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
LINC00648-201ENST00000553747 GP6Q9HCN6 339 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 PALD1Q9ULE6 856 aa5.26□□□□□ -1.57
LINC00648-201ENST00000553747 LTBP3Q9NS15 1303 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 FSHBP01225 129 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 GSTM1P09488 218 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 ERCC5P28715 1186 aaPredicted RBP5.25□□□□□ -1.57
LINC00648-201ENST00000553747 NOP2P46087 812 aaKnown RBP5.25□□□□□ -1.57
LINC00648-201ENST00000553747 GNL2Q13823 731 aaKnown RBP5.25□□□□□ -1.57
LINC00648-201ENST00000553747 NT5DC1Q5TFE4 455 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 FIBCD1Q8N539 461 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 NAT16Q8N8M0 369 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 SPATA25Q9BR10 227 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 AP5S1Q9NUS5 200 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 USP40Q9NVE5 1235 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 STRIP2Q9ULQ0 834 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 GPR55Q9Y2T6 319 aaPredicted RBP5.25□□□□□ -1.57
LINC00648-201ENST00000553747 SF3B6Q9Y3B4 125 aaKnown RBP5.25□□□□□ -1.57
LINC00648-201ENST00000553747 ZNF451Q9Y4E5 1061 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 FHOD1Q9Y613 1164 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 TAF6LQ9Y6J9 622 aa5.25□□□□□ -1.57
LINC00648-201ENST00000553747 A0A1W2PQH9 124 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 WTIPA6NIX2 430 aaPredicted RBP5.24□□□□□ -1.57
LINC00648-201ENST00000553747 FADS2P1A8MWK0 482 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 H0Y8X5 98 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 OVOL3O00110 214 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 MATN3O15232 486 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 TCF3P15923 654 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 PRKCAP17252 672 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 SLC7A5Q01650 507 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 ZFYVE27Q5T4F4 411 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 HEATR6Q6AI08 1181 aaKnown RBP5.24□□□□□ -1.57
LINC00648-201ENST00000553747 GALNT18Q6P9A2 607 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 ADAT2Q7Z6V5 191 aaKnown RBP5.24□□□□□ -1.57
LINC00648-201ENST00000553747 SLC16A11Q8NCK7 471 aa5.24□□□□□ -1.57
LINC00648-201ENST00000553747 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms