RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 HMGCRP04035 888 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 GCKRQ14397 625 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 TAF7LQ5H9L4 462 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 LRRC69Q6ZNQ3 347 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 C15orf52Q6ZUT6 534 aaKnown RBP7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ZNF804AQ7Z570 1209 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 RAB44Q7Z6P3 723 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ZKSCAN4Q969J2 545 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ARID3AQ99856 593 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 PRDM12Q9H4Q4 367 aa7.04□□□□□ -1.28
SMARCE1P3-201ENST00000553649 TCP10L2B9ZVM9 353 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 C9orf172C9J069 976 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ADH7P40394 386 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 EPHB4P54760 987 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 MAP3K21Q5TCX8 1036 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 POM121Q96HA1 1249 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ZNF594Q96JF6 807 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 PARK7Q99497 189 aaKnown RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 MYH16Q9H6N6 1097 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 TDRD3Q9H7E2 651 aaKnown RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 COG6Q9Y2V7 657 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 PCDHGA11Q9Y5H2 935 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 USP34Q70CQ2 3546 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 PKD1L2Q7Z442 2459 aa7.03□□□□□ -1.28
SMARCE1P3-201ENST00000553649 ARAP2Q8WZ64 1704 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LTBP2Q14767 1821 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 A0A0A0MRY4 1105 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 EML1O00423 815 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CSF1RP07333 972 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CACNB3P54284 484 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PPATQ06203 517 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FLIIQ13045 1269 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TWISTNBQ3B726 338 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MFSD14BQ5SR56 506 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PLPP7Q8NBV4 271 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 DNAAF4Q8WXU2 420 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 BADQ92934 168 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TIFAQ96CG3 184 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PLA2G12BQ9BX93 195 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TMEM39BQ9GZU3 492 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CD320Q9NPF0 282 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CNNM1Q9NRU3 951 aa7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ZNF70Q9UC06 446 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 RPAP1Q9BWH6 1393 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MYH3P11055 1940 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 F6X3S4 739 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 APBB1O00213 710 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 IL1R1P14778 569 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 GYG1P46976 350 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CASP7P55210 303 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CHAF1AQ13111 956 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CCDC57Q2TAC2 916 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SH3PXD2AQ5TCZ1 1133 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LMBR1LQ6UX01 489 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LDHAL6AQ6ZMR3 332 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LINS1Q8NG48 757 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TRIB2Q92519 343 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LENG1Q96BZ8 264 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 WRNIP1Q96S55 665 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 KCNH6Q9H252 994 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PRKAG2Q9UGJ0 569 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SERPINA10Q9UK55 444 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 GJD2Q9UKL4 321 aa7.01□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MAST2Q6P0Q8 1798 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CACNA1GO43497 2377 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 HSFX4A0A1B0GTS1 333 aaPredicted RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 HSFX3A0A1B0GWH4 333 aaPredicted RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ERC2O15083 957 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CRKP46108 304 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TNNI2P48788 182 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 RTP1P59025 263 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FOXO4P98177 505 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 VAC14Q08AM6 782 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SPEM2Q0P670 501 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 AAK1Q2M2I8 961 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 EPHA10Q5JZY3 1008 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 VPS37DQ86XT2 251 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 DZIP1LQ8IYY4 767 aaKnown RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ANKS1AQ92625 1134 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TP53INP1Q96A56 240 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 COL26A1Q96A83 441 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 COA7Q96BR5 231 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SLC45A1Q9Y2W3 748 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CHD9Q3L8U1 2897 aa7□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CFAP54Q96N23 3096 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms