RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SENP6Q9GZR1 1112 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-219ENST00000553488 TTYH1Q9H313 450 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-219ENST00000553488 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
ATXN3-219ENST00000553488 HDAC5Q9UQL6 1122 aa8.93□□□□□ -0.98
ATXN3-219ENST00000553488 SLC15A5A6NIM6 579 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 TRAK2O60296 914 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 MSCO60682 206 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 GH2P01242 217 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 VCAM1P19320 739 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 SCTRP47872 440 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 MFSD14CQ5VZR4 134 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 NAA16Q6N069 864 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-219ENST00000553488 FOXP4Q8IVH2 680 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-219ENST00000553488 MAFAQ8NHW3 353 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-219ENST00000553488 NPLOC4Q8TAT6 608 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 EDC3Q96F86 508 aaKnown RBP8.92□□□□□ -0.98
ATXN3-219ENST00000553488 LBHD1Q9BQE6 289 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-219ENST00000553488 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 LRP2BPQ9P2M1 347 aa8.92□□□□□ -0.98
ATXN3-219ENST00000553488 PNMA6EA0A0J9YXQ4 647 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 TTLL8A6PVC2 850 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 WFS1O76024 890 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 BAG3O95817 575 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 GNAI3P08754 354 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CT47B1P0C2W7 299 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 UQCRFS1P1P0C7P4 283 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CYP2C19P33261 490 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 PTGIRP43119 386 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CCNA1P78396 465 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 RELBQ01201 579 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 SHHQ15465 462 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 TATDN1Q6P1N9 297 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CATSPERGQ6ZRH7 1159 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 CRACR2BQ8N4Y2 399 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 NOL10Q9BSC4 688 aaKnown RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 SAP30BPQ9UHR5 308 aaKnown RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 BAZ2AQ9UIF9 1905 aaKnown RBP8.91□□□□□ -0.98
ATXN3-219ENST00000553488 GBF1Q92538 1859 aa8.91□□□□□ -0.98
ATXN3-219ENST00000553488 MCM3APO60318 1980 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 H3BM21 787 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 IGSF3O75054 1194 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 GLRX3O76003 335 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 HLA-DOAP06340 250 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 GUCY1A2P33402 732 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 DYNLL1P63167 89 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 SMAD3P84022 425 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 ZYXQ15942 572 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 TRIM60Q495X7 471 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 GJC2Q5T442 439 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 GORABQ5T7V8 394 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 OLFML2BQ68BL8 750 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 CCAR1Q8IX12 1150 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 ACER1Q8TDN7 264 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 DBNDD2Q9BQY9 259 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 KIAA1683Q9H0B3 1180 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 EHD4Q9H223 541 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 PIH1D3Q9NQM4 214 aaKnown RBP8.9□□□□□ -0.98
ATXN3-219ENST00000553488 ATP11BQ9Y2G3 1177 aa8.9□□□□□ -0.98
ATXN3-219ENST00000553488 ROBO3Q96MS0 1386 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TRIM43BA6NCK2 446 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 MAN1A2O60476 641 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 CNGA1P29973 690 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 SHMT1P34896 483 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 RARSP54136 660 aaKnown RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 USP14P54578 494 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 ATP2B2Q01814 1243 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 WDR78Q5VTH9 848 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 C1orf53Q5VUE5 145 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 SLC39A5Q6ZMH5 540 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 BADQ92934 168 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TRIM43Q96BQ3 446 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 INSM2Q96T92 566 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 FEZ1Q99689 392 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
ATXN3-219ENST00000553488 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 PRKAG2Q9UGJ0 569 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 SERPINB13Q9UIV8 391 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 TNNQ9UQP3 1299 aa8.89□□□□□ -0.99
ATXN3-219ENST00000553488 IVNS1ABPQ9Y6Y0 642 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms