RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 URI1O94763 535 aaPredicted RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 OR52Z1P0C646 297 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 CASP1P29466 404 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 COPB1P53618 953 aaKnown RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 GNG11P61952 73 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 NAA30Q147X3 362 aaPredicted RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 KARSQ15046 597 aaKnown RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 INF2Q27J81 1249 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 ASPRV1Q53RT3 343 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 COBLL1Q53SF7 1204 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 NAALADL2Q58DX5 795 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 NEK8Q86SG6 692 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 GIMAP8Q8ND71 665 aaPredicted RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 RASSF8Q8NHQ8 419 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 DHTKD1Q96HY7 919 aaPredicted RBP14.52□□□□□ -0.08
SHMT2-205ENST00000553474 BLZF1Q9H2G9 400 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 BICDL2A1A5D9 508 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 KCNJ18B7U540 433 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 GYPCP04921 128 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 PRCPP42785 496 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 KCNJ12Q14500 433 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 GRIK5Q16478 980 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 UTP14CQ5TAP6 766 aaKnown RBP14.52□□□□□ -0.09
SHMT2-205ENST00000553474 PPP1R18Q6NYC8 613 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 SMYD4Q8IYR2 804 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-205ENST00000553474 TBC1D16Q8TBP0 767 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 ADGRG1Q9Y653 693 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 FER1L6Q2WGJ9 1857 aa14.52□□□□□ -0.09
SHMT2-205ENST00000553474 SMCO2A6NFE2 343 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 ATP8B1O43520 1251 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 TADA3O75528 432 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 FAM193AP78312 1265 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 CBX1P83916 185 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 GOLGA8FQ08AF8 430 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 GOLGA8DPQ0D2H9 430 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 ERCC6LQ2NKX8 1250 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 CYP26C1Q6V0L0 522 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 SP8Q8IXZ3 490 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 IQCDQ96DY2 449 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 COA1Q9GZY4 146 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 FAM53CQ9NYF3 392 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 SWAP70Q9UH65 585 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 MRFAP1Q9Y605 127 aa14.51□□□□□ -0.09
SHMT2-205ENST00000553474 KIF5CO60282 957 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 CASP14P31944 242 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 FAM114A1Q8IWE2 563 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 KRT222Q8N1A0 295 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 REXO1Q8N1G1 1221 aaKnown RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 RASGRP4Q8TDF6 673 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 STAMQ92783 540 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 KIFC2Q96AC6 838 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 RAB34Q9BZG1 259 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 TMEM60Q9H2L4 133 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 ABHD10Q9NUJ1 306 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 SAP30BPQ9UHR5 308 aaKnown RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 ADAMTS3O15072 1205 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 KLRC4O43908 158 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 SNHG28P0DPA3 235 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 GABPB1Q06547 395 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 BMS1Q14692 1282 aaKnown RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 SLC4A8Q2Y0W8 1093 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 DPP8Q6V1X1 898 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 CABP7Q86V35 215 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 GPR161Q8N6U8 529 aaKnown RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 CEP95Q96GE4 821 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 GPR101Q96P66 508 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-205ENST00000553474 C7orf25Q9BPX7 421 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 STK17AQ9UEE5 414 aa14.5□□□□□ -0.09
SHMT2-205ENST00000553474 SOWAHDA6NJG2 315 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 LGALS16A8MUM7 142 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 DNM2P50570 870 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 GABPAQ06546 454 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 ARHGAP29Q52LW3 1261 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 JAKMIP3Q5VZ66 844 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 HOMEZQ8IX15 550 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 ARID3AQ99856 593 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 NUP58Q9BVL2 599 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 LRRC27Q9C0I9 530 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 MTMR4Q9NYA4 1195 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 MAGEC2Q9UBF1 373 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-205ENST00000553474 POLLQ9UGP5 575 aa14.49□□□□□ -0.09
SHMT2-205ENST00000553474 C6orf229H3BNL8 230 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 FANCGO15287 622 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 CCNT1O60563 726 aaKnown RBP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 PDHBP11177 359 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 CCT6AP40227 531 aaKnown RBP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHMT2-205ENST00000553474 PDIA5Q14554 519 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 PTPN21Q16825 1174 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 FOXR2Q6PJQ5 311 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 CREBRFQ8IUR6 639 aa14.48□□□□□ -0.09
SHMT2-205ENST00000553474 WDR24Q96S15 920 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms