RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 LMNB1P20700 586 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 SLC12A2P55011 1212 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PLA2G4DQ86XP0 818 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
SYNE2-208ENST00000553289 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 KRT12Q99456 494 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 RIOK1Q9BRS2 568 aaKnown RBP12.65□□□□□ -0.38
SYNE2-208ENST00000553289 GREM2Q9H772 168 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 TACC3Q9Y6A5 838 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.65□□□□□ -0.38
SYNE2-208ENST00000553289 XDHP47989 1333 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 STAM2O75886 525 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 CYP21A2P08686 494 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 ABCB4P21439 1286 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 CNGA1P29973 690 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PHKA1P46020 1223 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PKP1Q13835 747 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 ZSCAN26Q16670 478 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-208ENST00000553289 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
SYNE2-208ENST00000553289 PFDN4Q9NQP4 134 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
SYNE2-208ENST00000553289 CASQ2O14958 399 aaPredicted RBP12.65□□□□□ -0.39
SYNE2-208ENST00000553289 ABCD1P33897 745 aa12.65□□□□□ -0.39
SYNE2-208ENST00000553289 LRMPQ12912 555 aa12.65□□□□□ -0.39
SYNE2-208ENST00000553289 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.39
SYNE2-208ENST00000553289 EXOC3L4Q17RC7 722 aa12.65□□□□□ -0.39
SYNE2-208ENST00000553289 SLFN13Q68D06 897 aa12.65□□□□□ -0.39
SYNE2-208ENST00000553289 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.65□□□□□ -0.39
SYNE2-208ENST00000553289 STK17AQ9UEE5 414 aa12.65□□□□□ -0.39
SYNE2-208ENST00000553289 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.39
SYNE2-208ENST00000553289 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 GNGT1P63211 74 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 LMNB2Q03252 620 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 TRIM11Q96F44 468 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 CNOT6LQ96LI5 555 aaKnown RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 TUBGCP2Q9BSJ2 902 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 LTKP29376 864 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ADCY8P40145 1251 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ADCK5Q3MIX3 580 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 USP21Q9UK80 565 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ADD2P35612 726 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 LARP4BQ92615 738 aaKnown RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 MLXIPQ9HAP2 919 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 CSADQ9Y600 493 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 USP6P35125 1406 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 MAGI3Q5TCQ9 1506 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 CCDC38Q502W7 563 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
SYNE2-208ENST00000553289 ADPGKQ9BRR6 497 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 RNF14Q9UBS8 474 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 PHLPP2Q6ZVD8 1323 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
SYNE2-208ENST00000553289 EIF3CLB5ME19 914 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 GRM1Q13255 1194 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 KRT81Q14533 505 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 SEPT2Q15019 361 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 PPP4R1Q8TF05 950 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 EIF3CQ99613 913 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 SLFN14P0C7P3 912 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 ALAS1P13196 640 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 YARSP54577 528 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 ZNF658Q5TYW1 1059 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
SYNE2-208ENST00000553289 MFAP3P55082 362 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 P2RX5Q93086 422 aa12.63□□□□□ -0.39
SYNE2-208ENST00000553289 THAP12O43422 761 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 BUB1O43683 1085 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 IFNAR1P17181 557 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 CTAGE3PQ8IX95 158 aa12.62□□□□□ -0.39
SYNE2-208ENST00000553289 CCDC13Q8IYE1 715 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms