RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 XBP1P17861 261 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 GPSM2P81274 684 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 CKAP4Q07065 602 aaKnown RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 DDR1Q08345 913 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 SLC15A2Q16348 729 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PKN1Q16512 942 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PTPN21Q16825 1174 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 CRY2Q49AN0 593 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 APTXQ7Z2E3 356 aaKnown RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 MICALL1Q8N3F8 863 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 FANCBQ8NB91 859 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 EHBP1Q8NDI1 1231 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PAIP2Q9BPZ3 127 aaKnown RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 RNF41Q9H4P4 317 aaPredicted RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 MYO6Q9UM54 1294 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 TARSL2A2RTX5 802 aaKnown RBP8.23□□□□□ -1.09
BEST3-212ENST00000553096 BTBD18B2RXH4 712 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PPFIA4O75335 1185 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PLEKHA8P1O95397 391 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 VSNL1P62760 191 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 GRIN1Q05586 938 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 CUL4BQ13620 913 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 PPP2R5BQ15173 497 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 AFAP1L1Q8TED9 768 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 FERMT2Q96AC1 680 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 STK32BQ9NY57 414 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 LCMT1Q9UIC8 334 aa8.23□□□□□ -1.09
BEST3-212ENST00000553096 SIPA1L1O43166 1804 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 hCG_1642624A0A1W2PR95 340 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 TRIM66O15016 1216 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 TEX33O43247 280 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 ZBTB7AO95365 584 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 RHOXF2BP0C7M4 288 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 CASP14P31944 242 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 INHBEP58166 350 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 NR5A1Q13285 461 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 PPP2R5AQ15172 486 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 C11orf91Q3C1V1 193 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 MFSD4BQ5TF39 518 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 APBB1IPQ7Z5R6 666 aaPredicted RBP8.22□□□□□ -1.09
BEST3-212ENST00000553096 SH3RF1Q7Z6J0 888 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 EFCAB13Q8IY85 973 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 NUP133Q8WUM0 1156 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 ESR2Q92731 530 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 RHOXF2Q9BQY4 288 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
BEST3-212ENST00000553096 HAUS4Q9H6D7 363 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 LIMA1Q9UHB6 759 aaKnown RBP8.22□□□□□ -1.09
BEST3-212ENST00000553096 XDHP47989 1333 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 ERICH2A1L162 156 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 TRIM75PA6NK02 468 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 WNT7AO00755 349 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 ADAMTS3O15072 1205 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 CORO7P57737 925 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 TROAPQ12815 778 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 SETDB1Q15047 1291 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 EARS2Q5JPH6 523 aaKnown RBP8.22□□□□□ -1.09
BEST3-212ENST00000553096 FAM47AQ5JRC9 791 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 SPECC1Q5M775 1068 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 IQCEQ6IPM2 695 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 SH3RF3Q8TEJ3 882 aaPredicted RBP8.22□□□□□ -1.09
BEST3-212ENST00000553096 CPLX3Q8WVH0 158 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 MED15Q96RN5 788 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 UBAC1Q9BSL1 405 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 ABHD10Q9NUJ1 306 aa8.22□□□□□ -1.09
BEST3-212ENST00000553096 CNTNAP5Q8WYK1 1306 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 EIF3CLB5ME19 914 aaKnown RBP8.21□□□□□ -1.09
BEST3-212ENST00000553096 ORC4O43929 436 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 GYPCP04921 128 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 ADRA2BP18089 450 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 RHBDL3P58872 404 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 AMPD2Q01433 879 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 NPY5RQ15761 445 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 RUBCNQ92622 972 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 EIF3CQ99613 913 aaKnown RBP8.21□□□□□ -1.09
BEST3-212ENST00000553096 CSRNP2Q9H175 543 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 ANKIB1Q9P2G1 1089 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 STK24Q9Y6E0 443 aa8.21□□□□□ -1.09
BEST3-212ENST00000553096 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.09
BEST3-212ENST00000553096 SNED1Q8TER0 1413 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 ROBO3Q96MS0 1386 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 SCN9AQ15858 1988 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 LRRC10BA6NIK2 292 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 PSMD14O00487 310 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 CAND2O75155 1236 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 IPO7O95373 1038 aaKnown RBP8.21□□□□□ -1.1
BEST3-212ENST00000553096 CPP00450 1065 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 USP14P54578 494 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 CCDC70Q6NSX1 233 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 LRRC31Q6UY01 552 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 ZNF662Q6ZS27 426 aa8.21□□□□□ -1.1
BEST3-212ENST00000553096 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms