RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 CCDC155Q8N6L0 562 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 OR2W6PQ8NHA6 318 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 ISCA1Q9BUE6 129 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 PACSIN2Q9UNF0 486 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 MYH2Q9UKX2 1941 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 C1orf167Q5SNV9 1468 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 SHTN1A0MZ66 631 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 OPLAHO14841 1288 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 BUB1O43683 1085 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 CSF1RP07333 972 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 BCAMP50895 628 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 NAP1L1P55209 391 aaKnown RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 ATP2C1P98194 919 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 SEC23AQ15436 765 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 QPCTQ16769 361 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 CCDC96Q2M329 555 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 MIIPQ5JXC2 388 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 DNAAF5Q86Y56 855 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 OTUD6BQ8N6M0 293 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 ENAHQ8N8S7 591 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 IFT81Q8WYA0 676 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 MTMR8Q96EF0 704 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 CCDC43Q96MW1 224 aaKnown RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 OSBPL9Q96SU4 736 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 CEP83Q9Y592 693 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 TNKSO95271 1327 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 SOS2Q07890 1332 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-214ENST00000552783 FAM205AQ6ZU69 1335 aa5.41□□□□□ -1.54
LIMA1-214ENST00000552783 CHD4Q14839 1912 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 LTBP4Q8N2S1 1624 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 ATRNO75882 1429 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CAMTA1Q9Y6Y1 1673 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 FRMD3A2A2Y4 597 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 ERVV-2B6SEH9 535 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 H0YHG0 523 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 DNM1LO00429 736 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 KRT86O43790 486 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 KLRC4O43908 158 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 XBP1P17861 261 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 KRT2P35908 639 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CTSWP56202 376 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 SKOR1P84550 965 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 PTPROQ16827 1216 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 RNF187Q5TA31 235 aaPredicted RBP5.4□□□□□ -1.54
LIMA1-214ENST00000552783 TTI2Q6NXR4 508 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 BRINP3Q76B58 766 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 TICAM2Q86XR7 235 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CCDC13Q8IYE1 715 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 IQCKQ8N0W5 287 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 MMGT1Q8N4V1 131 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 ZBTB38Q8NAP3 1195 aaPredicted RBP5.4□□□□□ -1.54
LIMA1-214ENST00000552783 ZNF473Q8WTR7 871 aaKnown RBP5.4□□□□□ -1.54
LIMA1-214ENST00000552783 WASF1Q92558 559 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CABS1Q96KC9 395 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 TUBGCP2Q9BSJ2 902 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 TLR10Q9BXR5 811 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CENPHQ9H3R5 247 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 CEP131Q9UPN4 1083 aa5.4□□□□□ -1.54
LIMA1-214ENST00000552783 PDS5AQ29RF7 1337 aaKnown RBP5.4□□□□□ -1.54
LIMA1-214ENST00000552783 DCDC2CA8MYV0 355 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 GTPBP6O43824 516 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 FSBPO95073 299 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 SRGNP10124 158 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 FCER1AP12319 257 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 SF3B2Q13435 895 aaKnown RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 ANKRD40Q6AI12 368 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 SMIM5Q71RC9 77 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 TRIM47Q96LD4 638 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 CCT8L2Q96SF2 557 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 TMEM60Q9H2L4 133 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 DONSONQ9NYP3 566 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 STIM2Q9P246 746 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 CCDC189A1A4V9 331 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 GOLGA8KD6RF30 607 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 PDE8BO95263 885 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 HPDP32754 393 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 GFPT1Q06210 699 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 CKAP4Q07065 602 aaKnown RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 TBC1D8BQ0IIM8 1120 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 STK4Q13043 487 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 GIGYF2Q6Y7W6 1299 aaKnown RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 NLRP10Q86W26 655 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 C2CD5Q86YS7 1000 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 SRBD1Q8N5C6 995 aaKnown RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 C4orf32Q8N8J7 132 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 SPATA5Q8NB90 893 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 BANK1Q8NDB2 785 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 MYCBPAPQ8TBZ2 947 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 STAG1Q8WVM7 1258 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 PCMTD1Q96MG8 357 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 OSBPL7Q9BZF2 842 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 EPB41L5Q9HCM4 733 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 FAM207AQ9NSI2 230 aaPredicted RBP5.4□□□□□ -1.55
LIMA1-214ENST00000552783 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.55
LIMA1-214ENST00000552783 NID2Q14112 1375 aa5.39□□□□□ -1.55
LIMA1-214ENST00000552783 ABCC12Q96J65 1359 aa5.39□□□□□ -1.55
LIMA1-214ENST00000552783 RASSF9O75901 435 aa5.39□□□□□ -1.55
LIMA1-214ENST00000552783 UQCRFS1P1P0C7P4 283 aa5.39□□□□□ -1.55
LIMA1-214ENST00000552783 EPB41P11171 864 aaKnown RBP5.39□□□□□ -1.55
LIMA1-214ENST00000552783 TMOD1P28289 359 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms