RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 MRPL11Q9Y3B7 192 aaKnown RBP9.25□□□□□ -0.93
CHPT1-208ENST00000552215 ADAMTS3O15072 1205 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 SMC2O95347 1197 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 GRIN1Q05586 938 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 CYP2W1Q8TAV3 490 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 SNX29Q8TEQ0 813 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 NYAP2Q9P242 653 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 USP2O75604 605 aaPredicted RBP9.25□□□□□ -0.93
CHPT1-208ENST00000552215 ASIC1P78348 528 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 BRAPQ7Z569 592 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 WNK4Q96J92 1243 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 CSRNP2Q9H175 543 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PDS5AQ29RF7 1337 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 NDUFA8P51970 172 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 RESTQ13127 1097 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 KRT79Q5XKE5 535 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 KLRG1Q96E93 195 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 TRIM5Q9C035 493 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 TSPY26PQ9H489 355 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 KCNH3Q9ULD8 1083 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PCDHA6Q9UN73 950 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PCDHA8Q9Y5H6 950 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 GAS7O60861 476 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 OSBPP22059 807 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 USP50Q70EL3 339 aaPredicted RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 POTEDQ86YR6 584 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 GLG1Q92896 1179 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 ANO3Q9BYT9 981 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 EFCC1Q9HA90 598 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 ADAMTS7Q9UKP4 1686 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PNOCQ13519 176 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 ZSCAN23Q3MJ62 389 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 CCDC47Q96A33 483 aaKnown RBP9.24□□□□□ -0.93
CHPT1-208ENST00000552215 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 CCDC39Q9UFE4 941 aa9.24□□□□□ -0.93
CHPT1-208ENST00000552215 NTRK3Q16288 839 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 FAM47CQ5HY64 1035 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 DNTTIP2Q5QJE6 756 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 SMYD4Q8IYR2 804 aaPredicted RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 DCAF4Q8WV16 495 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 RAB34Q9BZG1 259 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 IRS2Q9Y4H2 1338 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 GABPAQ06546 454 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 PDE4DQ08499 809 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 ERO1BQ86YB8 467 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 PIGOQ8TEQ8 1089 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 EHMT1Q9H9B1 1298 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 SUGCTQ9HAC7 445 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 BAZ2AQ9UIF9 1905 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 SBF2Q86WG5 1849 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 PALM3A6NDB9 673 aaPredicted RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 ZNF202O95125 648 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 KCNA4P22459 653 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 CNTN2Q02246 1040 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.936e-7■■■■□ 21.5
CHPT1-208ENST00000552215 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 CTTNQ14247 550 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 KCNB2Q92953 911 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 EMILIN3Q9NT22 766 aa9.23□□□□□ -0.93
CHPT1-208ENST00000552215 KIAA0100Q14667 2235 aaKnown RBP9.23□□□□□ -0.93
CHPT1-208ENST00000552215 CCDC192P0DO97 292 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 PFKFB1P16118 471 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 ZNF280AP59817 542 aaPredicted RBP9.22□□□□□ -0.93
CHPT1-208ENST00000552215 FILIP1Q7Z7B0 1213 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 TAAR1Q96RJ0 339 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 FEM1BQ9UK73 627 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 PTMSP20962 102 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 NASPP49321 788 aaPredicted RBP9.22□□□□□ -0.93
CHPT1-208ENST00000552215 RPS6P62753 249 aaKnown RBP9.22□□□□□ -0.93
CHPT1-208ENST00000552215 CACNA1SQ13698 1873 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 PKN1Q16512 942 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 STXBP3O00186 592 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms