RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 TSPY8P0CW00 308 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 ITGA7Q13683 1181 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 OTOP2Q7RTS6 562 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 ADAMTS19Q8TE59 1207 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 SLC28A3Q9HAS3 691 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
RAB5C-209ENST00000552162 REV3LO60673 3130 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 ZNF536O15090 1300 aa19.43■□□□□ 0.7
RAB5C-209ENST00000552162 NCOR1O75376 2440 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 ZFYP08048 801 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-209ENST00000552162 PTGS1P23219 599 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 CCL23P55773 120 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 MRPS5P82675 430 aaKnown RBP19.42■□□□□ 0.7
RAB5C-209ENST00000552162 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-209ENST00000552162 TSHZ3Q63HK5 1081 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 FAM160B2Q86V87 743 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 GPATCH3Q96I76 525 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 AP5M1Q9H0R1 490 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
RAB5C-209ENST00000552162 LCTP09848 1927 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 BDP1A6H8Y1 2624 aa19.42■□□□□ 0.7
RAB5C-209ENST00000552162 ZEB2O60315 1214 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 B4GALT4O60513 344 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 SMPD1P17405 629 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 PDE4BQ07343 736 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 TKFCQ3LXA3 575 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 IFNL3Q8IZI9 196 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 CHURC1Q8WUH1 139 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 GMCL1Q96IK5 515 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 TRERF1Q96PN7 1200 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
RAB5C-209ENST00000552162 WNT8AQ9H1J5 351 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 GRIN2DO15399 1336 aa19.41■□□□□ 0.7
RAB5C-209ENST00000552162 PATL2C9JE40 543 aaKnown RBP19.4■□□□□ 0.7
RAB5C-209ENST00000552162 DYNC1LI2O43237 492 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-209ENST00000552162 ALAS1P13196 640 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 SLC1A4P43007 532 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 EEPD1Q7L9B9 569 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 FBXO16Q8IX29 292 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-209ENST00000552162 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 STAG1Q8WVM7 1258 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 CHMP4CQ96CF2 233 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 UHRF1Q96T88 793 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-209ENST00000552162 SEZ6LQ9BYH1 1024 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 TRPV6Q9H1D0 765 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 PDGFCQ9NRA1 345 aa19.4■□□□□ 0.7
RAB5C-209ENST00000552162 TRANK1O15050 2925 aa19.39■□□□□ 0.7
RAB5C-209ENST00000552162 RABGGTBP53611 331 aa19.39■□□□□ 0.69
RAB5C-209ENST00000552162 PSMC6P62333 389 aa19.39■□□□□ 0.69
RAB5C-209ENST00000552162 TFAP4Q01664 338 aa19.39■□□□□ 0.69
RAB5C-209ENST00000552162 PPP2R2DQ66LE6 453 aa19.39■□□□□ 0.69
RAB5C-209ENST00000552162 XIRP2A4UGR9 3374 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 SLC3A2P08195 630 aaKnown RBP19.38■□□□□ 0.69
RAB5C-209ENST00000552162 MCCP23508 829 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 PPARAQ07869 468 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 MUM1L1Q5H9M0 696 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 IQSEC1Q6DN90 963 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 TAPT1Q6NXT6 567 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 KCTD1Q719H9 257 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 MIER1Q8N108 512 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 NAPBQ9H115 298 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 Q9Y3F1 56 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
RAB5C-209ENST00000552162 ZBBXA8MT70 800 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 PLA2G6O60733 806 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 MYOGP15173 224 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 SNAP25P60880 206 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 LRRFIP1Q32MZ4 808 aaKnown RBP19.37■□□□□ 0.69
RAB5C-209ENST00000552162 TMEM63BQ5T3F8 832 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 RASGRP2Q7LDG7 609 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 RPUSD2Q8IZ73 545 aaKnown RBP19.37■□□□□ 0.69
RAB5C-209ENST00000552162 SCLYQ96I15 445 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 SEC62Q99442 399 aaKnown RBP19.37■□□□□ 0.69
RAB5C-209ENST00000552162 VTA1Q9NP79 307 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 RAPGEFL1Q9UHV5 662 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 PCDHA11Q9Y5I1 949 aa19.37■□□□□ 0.69
RAB5C-209ENST00000552162 PPP4R3BQ5MIZ7 849 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 NSMFQ6X4W1 530 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 MICALL1Q8N3F8 863 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 VWCEQ96DN2 955 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 ALDH8A1Q9H2A2 487 aaPredicted RBP19.36■□□□□ 0.69
RAB5C-209ENST00000552162 TSPYL2Q9H2G4 693 aaPredicted RBP19.36■□□□□ 0.69
RAB5C-209ENST00000552162 CCPG1Q9ULG6 757 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 PRR12Q9ULL5 1215 aa19.36■□□□□ 0.69
RAB5C-209ENST00000552162 ATP2A2P16615 1042 aaKnown RBP19.35■□□□□ 0.69
RAB5C-209ENST00000552162 C20orf194Q5TEA3 1177 aa19.35■□□□□ 0.69
RAB5C-209ENST00000552162 RCSD1Q6JBY9 416 aa19.35■□□□□ 0.69
RAB5C-209ENST00000552162 KIAA1211Q6ZU35 1233 aa19.35■□□□□ 0.69
RAB5C-209ENST00000552162 PURBQ96QR8 312 aaKnown RBP19.35■□□□□ 0.69
RAB5C-209ENST00000552162 SCN5AQ14524 2016 aa19.35■□□□□ 0.69
RAB5C-209ENST00000552162 TCF20Q9UGU0 1960 aaKnown RBP19.34■□□□□ 0.69
RAB5C-209ENST00000552162 TSPY2A6NKD2 308 aa19.34■□□□□ 0.69
RAB5C-209ENST00000552162 MORC4Q8TE76 937 aa19.34■□□□□ 0.69
RAB5C-209ENST00000552162 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
RAB5C-209ENST00000552162 TRMT13Q9NUP7 481 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms