RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 LAMA2P24043 3122 aaKnown RBP27.16■■□□□ 1.94
TROAP-216ENST00000551567 HIP1O00291 1037 aa27.16■■□□□ 1.94
TROAP-216ENST00000551567 Q7L0L9 218 aa27.16■■□□□ 1.94
TROAP-216ENST00000551567 DEFB123Q8N688 67 aa27.16■■□□□ 1.94
TROAP-216ENST00000551567 NUP133Q8WUM0 1156 aa27.16■■□□□ 1.94
TROAP-216ENST00000551567 ESR2Q92731 530 aa27.16■■□□□ 1.94
TROAP-216ENST00000551567 MOXD2PA6NHM9 499 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 ASB14A6NK59 587 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 CLTBP09497 229 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 CCSAPQ6IQ19 270 aaPredicted RBP27.15■■□□□ 1.94
TROAP-216ENST00000551567 GPR153Q6NV75 609 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 TTC14Q96N46 770 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 UPF3AQ9H1J1 476 aaKnown RBP27.15■■□□□ 1.94
TROAP-216ENST00000551567 SPC25Q9HBM1 224 aa27.15■■□□□ 1.94
TROAP-216ENST00000551567 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.14■■□□□ 1.94
TROAP-216ENST00000551567 CST5P28325 142 aaPredicted RBP27.14■■□□□ 1.94
TROAP-216ENST00000551567 IRX6P78412 446 aaPredicted RBP27.14■■□□□ 1.94
TROAP-216ENST00000551567 ZNF543Q08ER8 600 aa27.14■■□□□ 1.94
TROAP-216ENST00000551567 NOL8Q76FK4 1167 aaKnown RBP27.14■■□□□ 1.94
TROAP-216ENST00000551567 PURBQ96QR8 312 aaKnown RBP27.14■■□□□ 1.94
TROAP-216ENST00000551567 KDM4AO75164 1064 aa27.13■■□□□ 1.93
TROAP-216ENST00000551567 ASGR1P07306 291 aa27.13■■□□□ 1.93
TROAP-216ENST00000551567 PDE4AP27815 886 aa27.13■■□□□ 1.93
TROAP-216ENST00000551567 GJA9P57773 515 aa27.13■■□□□ 1.93
TROAP-216ENST00000551567 TNFAIP2Q03169 654 aa27.13■■□□□ 1.93
TROAP-216ENST00000551567 PCSK9Q8NBP7 692 aaKnown RBP27.13■■□□□ 1.93
TROAP-216ENST00000551567 NFIBO00712 420 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 ITGB8P26012 769 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 GNASQ5JWF2 1037 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 C9orf50Q5SZB4 431 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 EEPD1Q7L9B9 569 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 GLT1D1Q96MS3 346 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 DSCC1Q9BVC3 393 aa27.12■■□□□ 1.93
TROAP-216ENST00000551567 B4E1Z4 1266 aa27.11■■□□□ 1.93
TROAP-216ENST00000551567 SNHG28P0DPA3 235 aa27.11■■□□□ 1.93
TROAP-216ENST00000551567 BAATQ14032 418 aaPredicted RBP27.11■■□□□ 1.93
TROAP-216ENST00000551567 SHHQ15465 462 aa27.11■■□□□ 1.93
TROAP-216ENST00000551567 FBXO16Q8IX29 292 aaPredicted RBP27.11■■□□□ 1.93
TROAP-216ENST00000551567 VTI1AQ96AJ9 217 aa27.11■■□□□ 1.93
TROAP-216ENST00000551567 IL25Q9H293 177 aa27.11■■□□□ 1.93
TROAP-216ENST00000551567 PTPDC1A2A3K4 754 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 DCDC2CA8MYV0 355 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 GOLGA8HP0CJ92 632 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 PTGS1P23219 599 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 BEX3Q00994 111 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 IMMTQ16891 758 aaKnown RBP27.1■■□□□ 1.93
TROAP-216ENST00000551567 ANKRD33Q7Z3H0 272 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 IQCA1Q86XH1 822 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 PDGFCQ9NRA1 345 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 TMEM39AQ9NV64 488 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 COL6A3P12111 3177 aa27.1■■□□□ 1.93
TROAP-216ENST00000551567 KIAA0355O15063 1070 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 CTAGE5O15320 804 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 GSPT1P15170 499 aaKnown RBP27.09■■□□□ 1.93
TROAP-216ENST00000551567 RAG1P15918 1043 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 FAAP100Q0VG06 881 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 TTC22Q5TAA0 569 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 TLK2Q86UE8 772 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 DGKHQ86XP1 1220 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 CPVLQ9H3G5 476 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 ELP1O95163 1332 aa27.09■■□□□ 1.93
TROAP-216ENST00000551567 SLC30A10Q6XR72 485 aa27.08■■□□□ 1.93
TROAP-216ENST00000551567 PNMA1Q8ND90 353 aa27.08■■□□□ 1.93
TROAP-216ENST00000551567 TOX2Q96NM4 488 aa27.08■■□□□ 1.93
TROAP-216ENST00000551567 GNEQ9Y223 722 aaKnown RBP27.08■■□□□ 1.93
TROAP-216ENST00000551567 SMPD1P17405 629 aa27.07■■□□□ 1.92
TROAP-216ENST00000551567 CALML3P27482 149 aa27.07■■□□□ 1.92
TROAP-216ENST00000551567 ALDH5A1P51649 535 aaPredicted RBP27.07■■□□□ 1.92
TROAP-216ENST00000551567 GPATCH4Q5T3I0 446 aaKnown RBP27.07■■□□□ 1.92
TROAP-216ENST00000551567 CLEC4DQ8WXI8 215 aa27.07■■□□□ 1.92
TROAP-216ENST00000551567 ZSCAN10Q96SZ4 725 aaPredicted RBP27.07■■□□□ 1.92
TROAP-216ENST00000551567 KAT14Q9H8E8 782 aa27.07■■□□□ 1.92
TROAP-216ENST00000551567 ADD3Q9UEY8 706 aaKnown RBP27.07■■□□□ 1.92
TROAP-216ENST00000551567 CTNNA3Q9UI47 895 aa27.07■■□□□ 1.92
TROAP-216ENST00000551567 MYH6P13533 1939 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 A0A0U1RQG5 324 aaPredicted RBP27.06■■□□□ 1.92
TROAP-216ENST00000551567 CCDC178Q5BJE1 867 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 TMEM63BQ5T3F8 832 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 TAPT1Q6NXT6 567 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 MORC4Q8TE76 937 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 UBA5Q9GZZ9 404 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 AP5M1Q9H0R1 490 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 VTA1Q9NP79 307 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 MTMR10Q9NXD2 777 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 MROH7Q68CQ1 1323 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 WDR19Q8NEZ3 1342 aa27.06■■□□□ 1.92
TROAP-216ENST00000551567 DYNC1LI2O43237 492 aaPredicted RBP27.05■■□□□ 1.92
TROAP-216ENST00000551567 NT5C2P49902 561 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 NKX3-2P78367 333 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 FSCN1Q16658 493 aaKnown RBP27.05■■□□□ 1.92
TROAP-216ENST00000551567 USH1GQ495M9 461 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 RNF207Q6ZRF8 634 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 ENAHQ8N8S7 591 aaPredicted RBP27.05■■□□□ 1.92
TROAP-216ENST00000551567 ZSWIM5Q9P217 1185 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 PNMA2Q9UL42 364 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 TNKSO95271 1327 aa27.05■■□□□ 1.92
TROAP-216ENST00000551567 ARVCFO00192 962 aa27.04■■□□□ 1.92
TROAP-216ENST00000551567 CDK7P50613 346 aa27.04■■□□□ 1.92
TROAP-216ENST00000551567 EPHB4P54760 987 aa27.04■■□□□ 1.92
TROAP-216ENST00000551567 IQSEC1Q6DN90 963 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms