RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 STAT3P40763 770 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 GRIA2P42262 883 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 EVA1CP58658 441 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 GRIK4Q16099 956 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 LINC00114Q6XXX2 140 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 CLUHP3Q96NS8 147 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 IRF2BPLQ9H1B7 796 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 MAGEC2Q9UBF1 373 aaPredicted RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 NDOR1Q9UHB4 597 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 TRPC5Q9UL62 973 aaPredicted RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 DIS3Q9Y2L1 958 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 ITSN2Q9NZM3 1697 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 A0A087WZG4 1122 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 KCNQ2O43526 872 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 PREPP48147 710 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 MAP7Q14244 749 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 SHISA2Q6UWI4 295 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 DDX46Q7L014 1031 aaKnown RBP7.19□□□□□ -1.26
CPSF6-206ENST00000550987 THNSL2Q86YJ6 484 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 JAMLQ86YT9 394 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 ARHGEF39Q8N4T4 335 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 DNAJB8Q8NHS0 232 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 FBLIM1Q8WUP2 373 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 CCDC140Q96MF4 163 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 ASPNQ9BXN1 380 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 ASCC2Q9H1I8 757 aaPredicted RBP7.19□□□□□ -1.26
CPSF6-206ENST00000550987 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 TYW1Q9NV66 732 aaKnown RBP7.19□□□□□ -1.26
CPSF6-206ENST00000550987 SFMBT1Q9UHJ3 866 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 MAPRE3Q9UPY8 281 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
CPSF6-206ENST00000550987 ABCC1P33527 1531 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 DLC1Q96QB1 1528 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 A0A087X0B3 334 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 TBX1O43435 398 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 NEK4P51957 841 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 ZNF445P59923 1031 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 LRRTM3Q86VH5 581 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 DDX42Q86XP3 938 aaKnown RBP eCLIP7.18□□□□□ -1.26
CPSF6-206ENST00000550987 TRIM59Q8IWR1 403 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 AHI1Q8N157 1196 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 GIMAP7Q8NHV1 300 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 LEO1Q8WVC0 666 aaPredicted RBP7.18□□□□□ -1.26
CPSF6-206ENST00000550987 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 BTN2A2Q8WVV5 523 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 KCTD13Q8WZ19 329 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 OSBP2Q969R2 916 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 FBXL18Q96ME1 805 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 SF3B6Q9Y3B4 125 aaKnown RBP7.18□□□□□ -1.26
CPSF6-206ENST00000550987 GOLGB1Q14789 3259 aaKnown RBP7.18□□□□□ -1.26
CPSF6-206ENST00000550987 RGPD1P0DJD0 1748 aa7.18□□□□□ -1.26
CPSF6-206ENST00000550987 EFCAB14O75071 495 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 WFS1O76024 890 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 SLITRK5O94991 958 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 GABREP78334 506 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 FAM50AQ14320 339 aaKnown RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 ZNF385CQ66K41 422 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 FIBCD1Q8N539 461 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 ZNF513Q8N8E2 541 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 MRGPRX3Q96LB0 322 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 TARS2Q9BW92 718 aaKnown RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 PRDM14Q9GZV8 571 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 SEMA6CQ9H3T2 930 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 INTS7Q9NVH2 962 aaKnown RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 CGGBP1Q9UFW8 167 aaPredicted RBP7.17□□□□□ -1.26
CPSF6-206ENST00000550987 KCNH3Q9ULD8 1083 aa7.17□□□□□ -1.26
CPSF6-206ENST00000550987 DIP2CQ9Y2E4 1556 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 KRBA1A5PL33 1030 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 ALG1L2C9J202 215 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 OPA1O60313 960 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 PARNO95453 639 aaKnown RBP7.16□□□□□ -1.26
CPSF6-206ENST00000550987 APBA3O96018 575 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 SNRPB2P08579 225 aaKnown RBP7.16□□□□□ -1.26
CPSF6-206ENST00000550987 SDSP20132 328 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 HOXC12P31275 282 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 FLT3P36888 993 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 ECI1P42126 302 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 CCDC181Q5TID7 509 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 ANKLE2Q86XL3 938 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
CPSF6-206ENST00000550987 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 VWCEQ96DN2 955 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 ABHD8Q96I13 439 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 MAGEB10Q96LZ2 347 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms