RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 FTOQ9C0B1 505 aaKnown RBP eCLIP13.52□□□□□ -0.24
NR4A1-215ENST00000550557 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.24
NR4A1-215ENST00000550557 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 EXOC8Q8IYI6 725 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 TTC14Q96N46 770 aa13.52□□□□□ -0.24
NR4A1-215ENST00000550557 INO80B-WBP1J3KQ70 363 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 EZRP15311 586 aaKnown RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 PRPHP41219 470 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 SESTD1Q86VW0 696 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 WDR11Q9BZH6 1224 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 INO80BQ9C086 356 aaPredicted RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 V9GYY5 206 aaPredicted RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 LARGE1O95461 756 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 FCER1AP12319 257 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 HMGCS2P54868 508 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 PPP2R5AQ15172 486 aa13.52□□□□□ -0.25
NR4A1-215ENST00000550557 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.25
NR4A1-215ENST00000550557 POLR3GO15318 223 aaPredicted RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 NTSR2O95665 410 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 FEM1BQ9UK73 627 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 UTYO14607 1347 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 SREBF2Q12772 1141 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 RAVER2Q9HCJ3 691 aaKnown RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 CYP2D6P10635 497 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 TBC1D8BQ0IIM8 1120 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
NR4A1-215ENST00000550557 COPB2P35606 906 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 PRAMEF18Q5VWM3 479 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 DGKHQ86XP1 1220 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
NR4A1-215ENST00000550557 PLSCR1O15162 318 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 CSGALNACT2Q8N6G5 542 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 RDH13Q8NBN7 331 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
NR4A1-215ENST00000550557 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 RNF26Q9BY78 433 aaPredicted RBP13.5□□□□□ -0.25
NR4A1-215ENST00000550557 EPHX2P34913 555 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 STXBP2Q15833 593 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 NAA15Q9BXJ9 866 aaKnown RBP13.5□□□□□ -0.25
NR4A1-215ENST00000550557 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 SLIT1O75093 1534 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 TMEM110-MUSTN1A8MSY1 372 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 K7ENM7 598 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 ABL1P00519 1130 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 TNNC2P02585 160 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 SCRN1Q12765 414 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
NR4A1-215ENST00000550557 EHBP1Q8NDI1 1231 aa13.5□□□□□ -0.25
NR4A1-215ENST00000550557 ZNF70Q9UC06 446 aaPredicted RBP13.5□□□□□ -0.25
NR4A1-215ENST00000550557 GNAT1P11488 350 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 STAT3P40763 770 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 SNAP25P60880 206 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 GNG11P61952 73 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 KIAA0753Q2KHM9 967 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 MMP19Q99542 508 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 BCL2L12Q9HB09 334 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 PARP2Q9UGN5 583 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 CCL15-CCL14A0A0B4J2E2 113 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 SHTN1A0MZ66 631 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
NR4A1-215ENST00000550557 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
NR4A1-215ENST00000550557 CCL15Q16663 113 aa13.49□□□□□ -0.25
NR4A1-215ENST00000550557 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms