RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PFKFB1P16118 471 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 MARCKSP29966 332 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 SLC16A2P36021 539 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 ECE1P42892 770 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 SYKP43405 635 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 RGS19P49795 217 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 FMR1Q06787 632 aaKnown RBP eCLIP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 SNW1Q13573 536 aaKnown RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 SHROOM1Q2M3G4 852 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 KANK3Q6NY19 840 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 ANP32BQ92688 251 aaKnown RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 RANBP17Q9H2T7 1088 aaKnown RBP14.31□□□□□ -0.12
CACNB3-217ENST00000550483 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 GRPEL1Q9HAV7 217 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
CACNB3-217ENST00000550483 DOCK1Q14185 1865 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
CACNB3-217ENST00000550483 TXLNAP40222 546 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 CLK2P49760 499 aaKnown RBP14.3□□□□□ -0.12
CACNB3-217ENST00000550483 HIRAP54198 1017 aaPredicted RBP14.3□□□□□ -0.12
CACNB3-217ENST00000550483 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
CACNB3-217ENST00000550483 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 SASS6Q6UVJ0 657 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 MOXD1Q6UVY6 613 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 COA7Q96BR5 231 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 C12orf42Q96LP6 360 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 MAF1Q9H063 256 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 ASTN2O75129 1339 aaPredicted RBP14.3□□□□□ -0.12
CACNB3-217ENST00000550483 ABCB11O95342 1321 aa14.3□□□□□ -0.12
CACNB3-217ENST00000550483 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 ZNF202O95125 648 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 ATP2B1P20020 1258 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 NDUFA8P51970 172 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 PTGDRQ13258 359 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 UVSSAQ2YD98 709 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 PPP4R3AQ6IN85 833 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
CACNB3-217ENST00000550483 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 AK8Q96MA6 479 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 SDF4Q9BRK5 362 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 KCNH3Q9ULD8 1083 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
CACNB3-217ENST00000550483 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
CACNB3-217ENST00000550483 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
CACNB3-217ENST00000550483 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 UNCXA6NJT0 531 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 PPP1R11O60927 126 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 PTPRAP18433 802 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 EPHX2P34913 555 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 IREB2P48200 963 aaKnown RBP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 USP11P51784 963 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 BACE1P56817 501 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 GRM1Q13255 1194 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 ZNF174Q15697 407 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 INF2Q27J81 1249 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 SPICE1Q8N0Z3 855 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 MAP3K20Q9NYL2 800 aaKnown RBP14.28□□□□□ -0.12
CACNB3-217ENST00000550483 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
CACNB3-217ENST00000550483 SCN4AP35499 1836 aa14.27□□□□□ -0.12
CACNB3-217ENST00000550483 MYPNQ86TC9 1320 aa14.27□□□□□ -0.12
CACNB3-217ENST00000550483 FAM205CA6NFA0 338 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 NEMFO60524 1076 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 INPP5BP32019 993 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 MCM7P33993 719 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 MAP3K9P80192 1104 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-217ENST00000550483 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
CACNB3-217ENST00000550483 CSADQ9Y600 493 aa14.27□□□□□ -0.13
CACNB3-217ENST00000550483 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 SLC26A4O43511 780 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 ICAM1P05362 532 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 OAZ1P54368 228 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 STX1AQ16623 288 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 TMEM266Q2M3C6 531 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 JAKMIP3Q5VZ66 844 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 PAXIP1Q6ZW49 1069 aaPredicted RBP14.26□□□□□ -0.13
CACNB3-217ENST00000550483 KRT26Q7Z3Y9 468 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 GAS2L3Q86XJ1 694 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
CACNB3-217ENST00000550483 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms