RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NYAP2Q9P242 653 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 MAPK8IP1Q9UQF2 711 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 NFE2L3Q9Y4A8 694 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 STAT6P42226 847 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 TPM4P67936 248 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 TMC6Q7Z403 805 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 CCDC84Q86UT8 332 aaPredicted RBP23.73■■□□□ 1.39
PRDM4-205ENST00000550376 MKL1Q969V6 931 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 TMOD2Q9NZR1 351 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 R3HCC1Q9Y3T6 440 aaKnown RBP23.73■■□□□ 1.39
PRDM4-205ENST00000550376 NDUFB10O96000 172 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 EGFRP00533 1210 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 UBA7P41226 1012 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 NAALADL2Q58DX5 795 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 ACER1Q8TDN7 264 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 TMEM232C9JQI7 657 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 SAMD1Q6SPF0 538 aaPredicted RBP23.72■■□□□ 1.39
PRDM4-205ENST00000550376 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
PRDM4-205ENST00000550376 OR52Z1P0C646 297 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 R3HDM1Q15032 1099 aaKnown RBP23.71■■□□□ 1.39
PRDM4-205ENST00000550376 KIAA1755Q5JYT7 1200 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 DNTTIP2Q5QJE6 756 aaKnown RBP23.71■■□□□ 1.39
PRDM4-205ENST00000550376 MLKLQ8NB16 471 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 PSTPIP2Q9H939 334 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 PCDHA1Q9Y5I3 950 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 NPM3O75607 178 aaKnown RBP23.71■■□□□ 1.39
PRDM4-205ENST00000550376 UBASH3AP57075 661 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 ZYXQ15942 572 aaKnown RBP23.71■■□□□ 1.39
PRDM4-205ENST00000550376 USH1GQ495M9 461 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 LRRC8AQ8IWT6 810 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 DISC1Q9NRI5 854 aa23.71■■□□□ 1.39
PRDM4-205ENST00000550376 DHX8Q14562 1220 aaKnown RBP23.7■■□□□ 1.38
PRDM4-205ENST00000550376 CDC37Q16543 378 aaPredicted RBP23.7■■□□□ 1.38
PRDM4-205ENST00000550376 DALRD3Q5D0E6 543 aaKnown RBP23.7■■□□□ 1.38
PRDM4-205ENST00000550376 RRAGBQ5VZM2 374 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 CNTNAP1P78357 1384 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 ESYT2A0FGR8 921 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 TPM3P06753 285 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 GOLGA8FQ08AF8 430 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 GOLGA8DPQ0D2H9 430 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 ATRNL1Q5VV63 1379 aa23.7■■□□□ 1.38
PRDM4-205ENST00000550376 TXLNAP40222 546 aa23.69■■□□□ 1.38
PRDM4-205ENST00000550376 RIC8AQ9NPQ8 531 aa23.69■■□□□ 1.38
PRDM4-205ENST00000550376 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
PRDM4-205ENST00000550376 CDK11BP21127 795 aaKnown RBP23.68■■□□□ 1.38
PRDM4-205ENST00000550376 MTMR8Q96EF0 704 aa23.68■■□□□ 1.38
PRDM4-205ENST00000550376 CCDC34Q96HJ3 373 aa23.68■■□□□ 1.38
PRDM4-205ENST00000550376 SPDYE2Q495Y8 402 aa23.68■■□□□ 1.38
PRDM4-205ENST00000550376 FAM151AQ8WW52 585 aa23.68■■□□□ 1.38
PRDM4-205ENST00000550376 GREB1LQ9C091 1923 aaPredicted RBP23.68■■□□□ 1.38
PRDM4-205ENST00000550376 PPP1R3GB7ZBB8 358 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 WNT10BO00744 389 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 PLCG1P19174 1290 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 CABP7Q86V35 215 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 TRIML1Q8N9V2 468 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 DCAF4Q8WV16 495 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 CUL5Q93034 780 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 GSDMAQ96QA5 445 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 GDAQ9Y2T3 454 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 CALCRLQ16602 461 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 TAOK3Q9H2K8 898 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 INTS13Q9NVM9 706 aa23.67■■□□□ 1.38
PRDM4-205ENST00000550376 PSDA5PKW4 1024 aaPredicted RBP23.66■■□□□ 1.38
PRDM4-205ENST00000550376 POTEMA6NI47 508 aa23.66■■□□□ 1.38
PRDM4-205ENST00000550376 NFKBIEO00221 500 aa23.66■■□□□ 1.38
PRDM4-205ENST00000550376 P2RX7Q99572 595 aaKnown RBP23.66■■□□□ 1.38
PRDM4-205ENST00000550376 GLIS2Q9BZE0 524 aaPredicted RBP23.66■■□□□ 1.38
PRDM4-205ENST00000550376 POLD1P28340 1107 aa23.66■■□□□ 1.38
PRDM4-205ENST00000550376 GRIPAP1Q4V328 841 aa23.66■■□□□ 1.38
PRDM4-205ENST00000550376 hCG_1984214I3L0E3 225 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 SKILP12757 684 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 MRPL12P52815 198 aaKnown RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 TGFB2P61812 414 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 ARMCX5Q6P1M9 558 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 ZNF713Q8N859 430 aaPredicted RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 ENOX1Q8TC92 643 aaKnown RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 JDP2Q8WYK2 163 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 MMTAG2Q9BU76 263 aaKnown RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 CTNND2Q9UQB3 1225 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 ASTN2O75129 1339 aaPredicted RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 GTPBP6O43824 516 aaPredicted RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 RPN1P04843 607 aaKnown RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 BMP3P12645 472 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 PRPHP41219 470 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
PRDM4-205ENST00000550376 MTMR9Q96QG7 549 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 NUDT12Q9BQG2 462 aa23.65■■□□□ 1.38
PRDM4-205ENST00000550376 LAD1O00515 517 aa23.64■■□□□ 1.38
PRDM4-205ENST00000550376 RASSF7Q02833 373 aa23.64■■□□□ 1.38
PRDM4-205ENST00000550376 CIAPIN1Q6FI81 312 aa23.64■■□□□ 1.38
PRDM4-205ENST00000550376 CREBRFQ8IUR6 639 aa23.64■■□□□ 1.38
PRDM4-205ENST00000550376 DACH1Q9UI36 760 aa23.64■■□□□ 1.38
PRDM4-205ENST00000550376 FAM177A1Q8N128 213 aaPredicted RBP23.64■■□□□ 1.37
PRDM4-205ENST00000550376 ZNF18P17022 549 aa23.63■■□□□ 1.37
PRDM4-205ENST00000550376 CCSER1Q9C0I3 900 aa23.63■■□□□ 1.37
PRDM4-205ENST00000550376 MYOZ2Q9NPC6 264 aa23.63■■□□□ 1.37
PRDM4-205ENST00000550376 SPTLC3Q9NUV7 552 aa23.63■■□□□ 1.37
PRDM4-205ENST00000550376 HERC5Q9UII4 1024 aaKnown RBP23.63■■□□□ 1.37
PRDM4-205ENST00000550376 USP27XA6NNY8 438 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms