RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
TROAP-211ENST00000549891 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.06■□□□□ 0.16
TROAP-211ENST00000549891 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 CTAGE5O15320 804 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 CD4P01730 458 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 BEX3Q00994 111 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
TROAP-211ENST00000549891 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 IQSEC1Q6DN90 963 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 CCPG1Q9ULG6 757 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 PRR12Q9ULL5 1215 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
TROAP-211ENST00000549891 Q9Y3F1 56 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 LCTP09848 1927 aa16.06■□□□□ 0.16
TROAP-211ENST00000549891 GBF1Q92538 1859 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 RANBP6O60518 1105 aaKnown RBP16.05■□□□□ 0.16
TROAP-211ENST00000549891 ITGA7Q13683 1181 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 ZNF365Q70YC5 407 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 C16orf59Q7L2K0 433 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 SLC43A3Q8NBI5 491 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 PBX4Q9BYU1 374 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 IL23AQ9NPF7 189 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 MSRAQ9UJ68 235 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
TROAP-211ENST00000549891 ASTN1O14525 1302 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 DYNC1LI2O43237 492 aaPredicted RBP16.04■□□□□ 0.16
TROAP-211ENST00000549891 ICAM1P05362 532 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 ACRP10323 421 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 CTDSPL2Q05D32 466 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 RAB30Q15771 203 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 HERVK_113Q902F9 699 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
TROAP-211ENST00000549891 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
TROAP-211ENST00000549891 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 ORC4O43929 436 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 NMT2O60551 498 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 FGBP02675 491 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 SMPD1P17405 629 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 CYP2C18P33260 490 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
TROAP-211ENST00000549891 MUM1L1Q5H9M0 696 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
TROAP-211ENST00000549891 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
TROAP-211ENST00000549891 EVI5LQ96CN4 794 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 PNMA2Q9UL42 364 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
TROAP-211ENST00000549891 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
TROAP-211ENST00000549891 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 PBX2P40425 430 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 NOVP48745 357 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 SNAP25P60880 206 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 TJAP1Q5JTD0 557 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 KIAA1211Q6ZU35 1233 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 RPUSD2Q8IZ73 545 aaKnown RBP16.02■□□□□ 0.16
TROAP-211ENST00000549891 MORC4Q8TE76 937 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
TROAP-211ENST00000549891 RANBP17Q9H2T7 1088 aaKnown RBP16.02■□□□□ 0.16
TROAP-211ENST00000549891 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 TOMM22Q9NS69 142 aa16.02■□□□□ 0.16
TROAP-211ENST00000549891 FOXP2O15409 715 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 FGRP09769 529 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
TROAP-211ENST00000549891 ALX1Q15699 326 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 BTNL9Q6UXG8 535 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 SLC28A3Q9HAS3 691 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 POLR3EQ9NVU0 708 aa16.01■□□□□ 0.15
TROAP-211ENST00000549891 B4GALT4O60513 344 aa16■□□□□ 0.15
TROAP-211ENST00000549891 SUPT20HL2P0C7V6 817 aa16■□□□□ 0.15
TROAP-211ENST00000549891 CPT1AP50416 773 aa16■□□□□ 0.15
TROAP-211ENST00000549891 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
TROAP-211ENST00000549891 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
TROAP-211ENST00000549891 PRDM12Q9H4Q4 367 aa16■□□□□ 0.15
TROAP-211ENST00000549891 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
TROAP-211ENST00000549891 GRIN2DO15399 1336 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 RAD50Q92878 1312 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 SLC16A2P36021 539 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 ALDH5A1P51649 535 aaPredicted RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 CCL23P55773 120 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 BAATQ14032 418 aaPredicted RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms