RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CABP5Q9NP86 173 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 SWAP70Q9UH65 585 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 SLC4A4Q9Y6R1 1079 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 PARP14Q460N5 1801 aa7.98□□□□□ -1.13
TMEM116-208ENST00000549537 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 M0R2C6 588 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 RNF113AO15541 343 aaKnown RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 INHAP05111 366 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GJB1P08034 283 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 ZFYP08048 801 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 CCL5P13501 91 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 MX1P20591 662 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GJA8P48165 433 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 CDK8P49336 464 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 ERVK-9P63128 1117 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 ERVK-24P63145 666 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 ZYXQ15942 572 aaKnown RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 SBK1Q52WX2 424 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GIMAP6Q6P9H5 292 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 CLEC10AQ8IUN9 316 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GPRC5AQ8NFJ5 357 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 PRR7Q8TB68 274 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 GTF3C2Q8WUA4 911 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 USP6NLQ92738 828 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 COA7Q96BR5 231 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 FEZ1Q99689 392 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 PORCNQ9H237 461 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 EPB41L4AQ9HCS5 686 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 PAK6Q9NQU5 681 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-208ENST00000549537 STAP2Q9UGK3 403 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 DNAH12Q6ZR08 3092 aa7.97□□□□□ -1.13
TMEM116-208ENST00000549537 FOXP2O15409 715 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 GPAA1O43292 621 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 LILRB3O75022 631 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 TIMP2P16035 220 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 UBXN2AP68543 259 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 AAMPQ13685 434 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 CSPP1Q1MSJ5 1256 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 CCDC17Q96LX7 622 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 PURBQ96QR8 312 aaKnown RBP7.96□□□□□ -1.14
TMEM116-208ENST00000549537 SEC62Q99442 399 aaKnown RBP7.96□□□□□ -1.14
TMEM116-208ENST00000549537 RPAP3Q9H6T3 665 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-208ENST00000549537 BTBD7Q9P203 1132 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 ARPP21Q9UBL0 812 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-208ENST00000549537 RABGAP1Q9Y3P9 1069 aa7.96□□□□□ -1.14
TMEM116-208ENST00000549537 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
TMEM116-208ENST00000549537 SPTBN5Q9NRC6 3674 aaKnown RBP7.95□□□□□ -1.14
TMEM116-208ENST00000549537 ZNF236Q9UL36 1845 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 MPHOSPH10O00566 681 aaKnown RBP7.95□□□□□ -1.14
TMEM116-208ENST00000549537 ERC2O15083 957 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
TMEM116-208ENST00000549537 RASA1P20936 1047 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 MAPK4P31152 587 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 PDE1AP54750 535 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 ICA1Q05084 483 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 ZMYM1Q5SVZ6 1142 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 MAP3K21Q5TCX8 1036 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 ANKRD45Q5TZF3 282 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 GPR142Q7Z601 462 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 TRIB2Q92519 343 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 PAGR1Q9BTK6 254 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 RNF208Q9H0X6 261 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 VCPKMTQ9H867 229 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 TMX2Q9Y320 296 aa7.95□□□□□ -1.14
TMEM116-208ENST00000549537 IGKV6D-41A0A0C4DH26 115 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 UPP2O95045 317 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 SGPL1O95470 568 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 IGHA2P01877 340 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 HMGCRP04035 888 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 EEF2P13639 858 aaKnown RBP7.94□□□□□ -1.14
TMEM116-208ENST00000549537 GNAT2P19087 354 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 CYP2B6P20813 491 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 COG2Q14746 738 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 QPCTQ16769 361 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 PLEKHH3Q7Z736 793 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 AMOTL1Q8IY63 956 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 FAM177A1Q8N128 213 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-208ENST00000549537 U2AF1L4Q8WU68 220 aaKnown RBP7.94□□□□□ -1.14
TMEM116-208ENST00000549537 SOCS4Q8WXH5 440 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 LPAR1Q92633 364 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 CDK15Q96Q40 435 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 FSD1Q9BTV5 496 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.94□□□□□ -1.14
TMEM116-208ENST00000549537 BIN2Q9UBW5 565 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-208ENST00000549537 PLIN4Q96Q06 1357 aa7.94□□□□□ -1.14
TMEM116-208ENST00000549537 COL11A1P12107 1806 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms