RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 ZNRF3Q9ULT6 936 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 A0A087WWV3 80 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 CYP3A4P08684 503 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
RAB5B-206ENST00000549505 CIITAP33076 1130 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 MRPL12P52815 198 aaKnown RBP11.29□□□□□ -0.6
RAB5B-206ENST00000549505 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-206ENST00000549505 FANCLQ9NW38 375 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 BIN1O00499 593 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 EHHADHQ08426 723 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 SEPT2Q15019 361 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 CUL5Q93034 780 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 Q4G0T1 1027 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 NOC3LQ8WTT2 800 aaKnown RBP11.28□□□□□ -0.6
RAB5B-206ENST00000549505 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 MAF1Q9H063 256 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
RAB5B-206ENST00000549505 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.6
RAB5B-206ENST00000549505 ABCB5Q2M3G0 1257 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 TMEM139Q8IV31 216 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 SPC24Q8NBT2 197 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 RASGRP4Q8TDF6 673 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 LRRC15Q8TF66 581 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.6
RAB5B-206ENST00000549505 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.6
RAB5B-206ENST00000549505 PVALEFA0A1B0GWK0 134 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 DPEP1P16444 411 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 SLFN13Q68D06 897 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 GRAMD1CQ8IYS0 662 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 UBA5Q9GZZ9 404 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
RAB5B-206ENST00000549505 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
RAB5B-206ENST00000549505 C21orf2O43822 256 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 ATP1A3P13637 1013 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 UBASH3AP57075 661 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 SPAG1Q07617 926 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 RRP1BQ14684 758 aaKnown RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 DHTKD1Q96HY7 919 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 ABCB11O95342 1321 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 PSMD14O00487 310 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 ICA1Q05084 483 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 DPF2Q92785 391 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 MYH7BA7E2Y1 1941 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 H7C1D1 291 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 KIF2AO00139 706 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 MEIS2O14770 477 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 STAT6P42226 847 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 JAG1P78504 1218 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 SYCP1Q15431 976 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 CABP7Q86V35 215 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 THAP9Q9H5L6 903 aa11.26□□□□□ -0.61
RAB5B-206ENST00000549505 TDRD3Q9H7E2 651 aaKnown RBP11.26□□□□□ -0.61
RAB5B-206ENST00000549505 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 F5H6K3 240 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
RAB5B-206ENST00000549505 KLRC3Q07444 240 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 LRMPQ12912 555 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
RAB5B-206ENST00000549505 HAS1Q92839 578 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 FBXW7Q969H0 707 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 TRIM9Q9C026 710 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
RAB5B-206ENST00000549505 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
RAB5B-206ENST00000549505 NDUFB10O96000 172 aa11.25□□□□□ -0.61
RAB5B-206ENST00000549505 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms