RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 DESP17661 470 aa18.05■□□□□ 0.48
CUX1-213ENST00000549414 SFMBT2Q5VUG0 894 aa18.05■□□□□ 0.48
CUX1-213ENST00000549414 GJA10Q969M2 543 aa18.05■□□□□ 0.48
CUX1-213ENST00000549414 MPHOSPH6Q99547 160 aaKnown RBP18.05■□□□□ 0.48
CUX1-213ENST00000549414 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
CUX1-213ENST00000549414 UBE2Q2LH0YL09 131 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 ZEB2O60315 1214 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 TNFAIP3P21580 790 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 TBC1D10BQ4KMP7 808 aaPredicted RBP18.04■□□□□ 0.48
CUX1-213ENST00000549414 C8orf74Q6P047 294 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 VSTM4Q8IW00 320 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 CCDC51Q96ER9 411 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 TRIM31Q9BZY9 425 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 KRT5P13647 590 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 CUL4BQ13620 913 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 ACRBPQ8NEB7 543 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 IMPG2Q9BZV3 1241 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 MEIS1O00470 390 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 ATRIPQ8WXE1 791 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 RABEP2Q9H5N1 569 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 MYO5BQ9ULV0 1848 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 PP2D1A8MPX8 630 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 GPATCH4Q5T3I0 446 aaKnown RBP18.04■□□□□ 0.48
CUX1-213ENST00000549414 CCDC25Q86WR0 208 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 KLHL7Q8IXQ5 586 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 SUPT20HQ8NEM7 779 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 CHURC1Q8WUH1 139 aa18.04■□□□□ 0.48
CUX1-213ENST00000549414 BUB1O43683 1085 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 NEBLO76041 1014 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
CUX1-213ENST00000549414 POLR2FP61218 127 aaKnown RBP18.03■□□□□ 0.48
CUX1-213ENST00000549414 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 AMNQ9BXJ7 453 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 SAR1BQ9Y6B6 198 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 CEP104O60308 925 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 CNKSR1Q969H4 720 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 WDR19Q8NEZ3 1342 aa18.03■□□□□ 0.48
CUX1-213ENST00000549414 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
CUX1-213ENST00000549414 CCDC50Q8IVM0 306 aa18.02■□□□□ 0.48
CUX1-213ENST00000549414 SLC35F6Q8N357 371 aa18.02■□□□□ 0.48
CUX1-213ENST00000549414 ARMCX3Q9UH62 379 aaPredicted RBP18.02■□□□□ 0.48
CUX1-213ENST00000549414 TESPA1A2RU30 521 aaPredicted RBP18.02■□□□□ 0.48
CUX1-213ENST00000549414 TNNC1P63316 161 aa18.02■□□□□ 0.48
CUX1-213ENST00000549414 ZNF526Q8TF50 670 aaPredicted RBP18.02■□□□□ 0.48
CUX1-213ENST00000549414 CCDC17Q96LX7 622 aa18.02■□□□□ 0.48
CUX1-213ENST00000549414 KDM3AQ9Y4C1 1321 aa18.02■□□□□ 0.48
CUX1-213ENST00000549414 ADAM9Q13443 819 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 VWA3BQ502W6 1294 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.47
CUX1-213ENST00000549414 NSUN4Q96CB9 384 aaKnown RBP18.02■□□□□ 0.47
CUX1-213ENST00000549414 CEP95Q96GE4 821 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 PLVAPQ9BX97 442 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 STK36Q9NRP7 1315 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 REREQ9P2R6 1566 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 XRCC5P13010 732 aaKnown RBP18.02■□□□□ 0.47
CUX1-213ENST00000549414 PLCB3Q01970 1234 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 PLA2G4DQ86XP0 818 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.47
CUX1-213ENST00000549414 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 NAA30Q147X3 362 aaPredicted RBP18.01■□□□□ 0.47
CUX1-213ENST00000549414 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
CUX1-213ENST00000549414 CFAP58Q5T655 872 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 USP49Q70CQ1 688 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 HOOK3Q86VS8 718 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 P2RX5Q93086 422 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 ATP6V0A2Q9Y487 856 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 TRIM49BA6NDI0 452 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 ABCB4P21439 1286 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 SMTNP53814 917 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
CUX1-213ENST00000549414 KMT5BQ4FZB7 885 aa18.01■□□□□ 0.47
CUX1-213ENST00000549414 SMCR8Q8TEV9 937 aaPredicted RBP18.01■□□□□ 0.47
CUX1-213ENST00000549414 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
CUX1-213ENST00000549414 NTSR2O95665 410 aa18■□□□□ 0.47
CUX1-213ENST00000549414 CA8P35219 290 aa18■□□□□ 0.47
CUX1-213ENST00000549414 SARM1Q6SZW1 724 aa18■□□□□ 0.47
CUX1-213ENST00000549414 MIGA2Q7L4E1 593 aa18■□□□□ 0.47
CUX1-213ENST00000549414 DISC1Q9NRI5 854 aa18■□□□□ 0.47
CUX1-213ENST00000549414 GCOM1H8Y6P7 765 aaPredicted RBP18■□□□□ 0.47
CUX1-213ENST00000549414 SPOPO43791 374 aa18■□□□□ 0.47
CUX1-213ENST00000549414 MYZAPP0CAP1 466 aa18■□□□□ 0.47
CUX1-213ENST00000549414 TUBB4BP68371 445 aa18■□□□□ 0.47
CUX1-213ENST00000549414 SRBD1Q8N5C6 995 aaKnown RBP18■□□□□ 0.47
CUX1-213ENST00000549414 POLD4Q9HCU8 107 aa18■□□□□ 0.47
CUX1-213ENST00000549414 GPSM2P81274 684 aa18■□□□□ 0.47
CUX1-213ENST00000549414 KANSL2Q9H9L4 492 aa18■□□□□ 0.47
CUX1-213ENST00000549414 OPA1O60313 960 aa18■□□□□ 0.47
CUX1-213ENST00000549414 POLR2MP0CAP2 368 aa18■□□□□ 0.47
CUX1-213ENST00000549414 HOXA13P31271 388 aaPredicted RBP18■□□□□ 0.47
CUX1-213ENST00000549414 MIER3Q7Z3K6 550 aa18■□□□□ 0.47
CUX1-213ENST00000549414 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
CUX1-213ENST00000549414 POTEMA6NI47 508 aa17.99■□□□□ 0.47
CUX1-213ENST00000549414 CYP27A1Q02318 531 aa17.99■□□□□ 0.47
CUX1-213ENST00000549414 KRT31Q15323 416 aa17.99■□□□□ 0.47
CUX1-213ENST00000549414 UBE2Q2Q8WVN8 375 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms