RNA–Protein interactions for RNA: ENST00000549287.1

TMEM106C-211, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-211ENST00000549287 ERGIC2Q96RQ1 377 aa8.56□□□□□ -1.04
TMEM106C-211ENST00000549287 LZTFL1Q9NQ48 299 aa8.56□□□□□ -1.04
TMEM106C-211ENST00000549287 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
TMEM106C-211ENST00000549287 JRKLQ9Y4A0 524 aa8.56□□□□□ -1.04
TMEM106C-211ENST00000549287 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 USP17L21D6R901 530 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 PRKAB2O43741 272 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 USP14P54578 494 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SIK1P57059 783 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 RPS8P62241 208 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 LRRC63Q05C16 580 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 GRM4Q14833 912 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 KARSQ15046 597 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ZSCAN26Q16670 478 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 TMEM266Q2M3C6 531 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SPECC1Q5M775 1068 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 CCDC122Q5T0U0 273 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ALS2CLQ60I27 953 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 C15orf52Q6ZUT6 534 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 TRAPPC11Q7Z392 1133 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ZNF572Q7Z3I7 529 aaPredicted RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SRBD1Q8N5C6 995 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 HELBQ8NG08 1087 aaPredicted RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 RASSF8Q8NHQ8 419 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ZNF507Q8TCN5 953 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 CPLX3Q8WVH0 158 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 UPF1Q92900 1129 aaKnown RBP eCLIP8.55□□□□□ -1.047e-6■■■■□ 24.4
TMEM106C-211ENST00000549287 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ALS2CR12Q96Q35 445 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 ZKSCAN3Q9BRR0 538 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 SPZ1Q9BXG8 430 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 VPS16Q9H269 839 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 MKNK2Q9HBH9 465 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 BARHL2Q9NY43 387 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 CTNND2Q9UQB3 1225 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
TMEM106C-211ENST00000549287 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 STRCP1A6NGW2 1772 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 GOLGA8KD6RF30 607 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 POLR3GO15318 223 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ANXA13P27216 316 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 PRCPP42785 496 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CRKLP46109 303 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 HNRNPH2P55795 449 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 NNTQ13423 1086 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CASP8Q14790 479 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 NONOQ15233 471 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 DDB1Q16531 1140 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 C12orf60Q5U649 245 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 PIK3AP1Q6ZUJ8 805 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 SV2BQ7L1I2 683 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ZSCAN29Q8IWY8 852 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 MMGT1Q8N4V1 131 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CSGALNACT2Q8N6G5 542 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 C1orf131Q8NDD1 294 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 P2RX5Q93086 422 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 FAM84BQ96KN1 310 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CALR3Q96L12 384 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CCDC42Q96M95 316 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 MED15Q96RN5 788 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 TSG101Q99816 390 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 TUBGCP2Q9BSJ2 902 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 CRACR2AQ9BSW2 395 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ZMYND12Q9H0C1 365 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 MRPL44Q9H9J2 332 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 DCP1AQ9NPI6 582 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 MINPP1Q9UNW1 487 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 DAAM1Q9Y4D1 1078 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 XDHP47989 1333 aa8.54□□□□□ -1.04
TMEM106C-211ENST00000549287 DUOX1Q9NRD9 1551 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 SSU72P8A0A1W2PR75 194 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 PALM3A6NDB9 673 aaPredicted RBP8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 M0R2N6 131 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 CES2O00748 559 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 LCA5LO95447 670 aa8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
TMEM106C-211ENST00000549287 MCM7P33993 719 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms