RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 KRT83P78385 493 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 MRPS25P82663 173 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 STK4Q13043 487 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 KCNB1Q14721 858 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 USP17L1Q7RTZ2 530 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 DRC1Q96MC2 740 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 ACBD3Q9H3P7 528 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 ZNF263O14978 683 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 CYTH3O43739 400 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 GOLGA8HP0CJ92 632 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 IDEP14735 1019 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 SLC20A2Q08357 652 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 RSPH14Q9UHP6 348 aa15.81■□□□□ 0.12
RAPGEF3-218ENST00000548919 ZC3H4Q9UPT8 1303 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 PRPF6O94906 941 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 CYLC1P35663 651 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 GGCXP38435 758 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 PDE4DQ08499 809 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 FBXO33Q7Z6M2 555 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCDC24Q8N4L8 307 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 ATP8A2Q9NTI2 1148 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 ZNHIT6Q9NWK9 470 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 LRWD1Q9UFC0 647 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 MAD2L2Q9UI95 211 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 IVLP07476 585 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 ERCC3P19447 782 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 KCNQ4P56696 695 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 TXNRD1Q16881 649 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 MIIPQ5JXC2 388 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 COG1Q8WTW3 980 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 P2RX5Q93086 422 aa15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 ARPP21Q9UBL0 812 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF3-218ENST00000548919 IPO7O95373 1038 aaKnown RBP15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 AARSP49588 968 aaKnown RBP eCLIP15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 ASIC1P78348 528 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 EZH2Q15910 746 aaKnown RBP15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 SLC44A5Q8NCS7 719 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 NOC4LQ9BVI4 516 aaKnown RBP15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 FLT1P17948 1338 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 ZBED6P86452 979 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 CABP7Q86V35 215 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 AFAP1L1Q8TED9 768 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 HDAC7Q8WUI4 952 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 PSMB7Q99436 277 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCSER1Q9C0I3 900 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 VIPAS39Q9H9C1 493 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 LAMB1P07942 1786 aa15.79■□□□□ 0.12
RAPGEF3-218ENST00000548919 EIF3CLB5ME19 914 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 STXBP3O00186 592 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 EPHB6O15197 1021 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCDC96Q2M329 555 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 LETM2Q2VYF4 491 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 MAP9Q49MG5 647 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 SLC51AQ86UW1 340 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 DHTKD1Q96HY7 919 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 EIF3CQ99613 913 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 TRIM9Q9C026 710 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 SH3GLB2Q9NR46 395 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 LAMB2P55268 1798 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCNE1P24864 410 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 HIBADHP31937 336 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 CKAP4Q07065 602 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 GOLGA6L1Q8N7Z2 621 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 EHBP1Q8NDI1 1231 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 MLXIPQ9HAP2 919 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 SMARCAL1Q9NZC9 954 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 STX8Q9UNK0 236 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 CAPN6Q9Y6Q1 641 aa15.78■□□□□ 0.12
RAPGEF3-218ENST00000548919 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 MYH10P35580 1976 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 AGPSO00116 658 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 RPS6KA5O75582 802 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 KIF5AQ12840 1032 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 CCNI2Q6ZMN8 369 aaPredicted RBP15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 MYH1P12882 1939 aa15.77■□□□□ 0.12
RAPGEF3-218ENST00000548919 TARSL2A2RTX5 802 aaKnown RBP15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 CXCR5P32302 372 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 TECP42680 631 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 MATR3P43243 847 aaKnown RBP eCLIP15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 GRM4Q14833 912 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 SBK1Q52WX2 424 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 CCDC42Q96M95 316 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 CRACR2AQ9BSW2 395 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 MKNK2Q9HBH9 465 aa15.77■□□□□ 0.11
RAPGEF3-218ENST00000548919 FAM207AQ9NSI2 230 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms